RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 HIST1H2BAQ96A08 127 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 NUDT9Q9BW91 350 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 FAM96BQ9Y3D0 163 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 OIP5O43482 229 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 DDAH2O95865 285 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 FAM157CP0CG43 387 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 TPT1P13693 172 aaKnown RBP12.45□□□□□ -0.42
GPC1-208ENST00000469694 APEHP13798 732 aaKnown RBP12.45□□□□□ -0.42
GPC1-208ENST00000469694 RCC1P18754 421 aaPredicted RBP12.45□□□□□ -0.42
GPC1-208ENST00000469694 SSBP1Q04837 148 aaKnown RBP12.45□□□□□ -0.42
GPC1-208ENST00000469694 PON3Q15166 354 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 OR7A5Q15622 319 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 CD226Q15762 336 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 TRIM61Q5EBN2 209 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 ATPAF1Q5TC12 328 aaPredicted RBP12.45□□□□□ -0.42
GPC1-208ENST00000469694 TCEAL6Q6IPX3 200 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 KIRREL2Q6UWL6 708 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 C16orf47Q6ZP98 133 aaPredicted RBP12.45□□□□□ -0.42
GPC1-208ENST00000469694 BAP18Q8IXM2 172 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 CPNE2Q96FN4 548 aaPredicted RBP12.45□□□□□ -0.42
GPC1-208ENST00000469694 ADOQ96SZ5 270 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 ZNF559Q9BR84 538 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 NAA11Q9BSU3 229 aaPredicted RBP12.45□□□□□ -0.42
GPC1-208ENST00000469694 SEMA5BQ9P283 1151 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 NOP16Q9Y3C1 178 aaKnown RBP12.45□□□□□ -0.42
GPC1-208ENST00000469694 HEATR5AQ86XA9 2040 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 IGHV5-10-1A0A0J9YXX1 117 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 NPIPB9F8W1W9 429 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 CLN5O75503 358 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 WNT11O96014 354 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 CSTAP01040 98 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 IGHV2-5P01817 119 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 HIST1H1CP16403 213 aaKnown RBP12.44□□□□□ -0.42
GPC1-208ENST00000469694 HLA-GP17693 338 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 SLC6A6P31641 620 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 DIO1P49895 249 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 CDNFQ49AH0 187 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 NKAPLQ5M9Q1 402 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 CBLN3Q6UW01 205 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 BIVMQ86UB2 503 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 PAQR4Q8N4S7 273 aaPredicted RBP12.44□□□□□ -0.42
GPC1-208ENST00000469694 WDSUB1Q8N9V3 476 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 RELTQ969Z4 430 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 ZNF524Q96C55 264 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 CLCC1Q96S66 551 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 DUSP23Q9BVJ7 150 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 POTEKPQ9BYX7 375 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 RTN4RQ9BZR6 473 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 AKIRIN1Q9H9L7 192 aaPredicted RBP12.44□□□□□ -0.42
GPC1-208ENST00000469694 DMRT1Q9Y5R6 373 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 BLACEA4D250 179 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 SELLP14151 372 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 MUC1P15941 1255 aaPredicted RBP12.44□□□□□ -0.42
GPC1-208ENST00000469694 SOX2P48431 317 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 CCR4P51679 360 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 PRKXP51817 358 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 FHL1Q13642 323 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 ALG10BQ5I7T1 473 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 OR2B11Q5JQS5 317 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 ZNF227Q86WZ6 799 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 OR10R2Q8NGX6 335 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 ZNF721Q8TF20 911 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 ZBTB8AQ96BR9 441 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 MVB12AQ96EY5 273 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 SEC61A2Q9H9S3 476 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 RHOFQ9HBH0 211 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 SUSD2Q9UGT4 822 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 A0A0B4J2E0 115 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 A0A1B0GX12 115 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 RAB3DO95716 219 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 MAS1P04201 325 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 TAS2R19P59542 299 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 NAAAQ02083 359 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 COX15Q7KZN9 410 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 C9orf40Q8IXQ3 194 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 GPX8Q8TED1 209 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 TCTEX1D2Q8WW35 142 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 DNAJA3Q96EY1 480 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 ZC3H10Q96K80 434 aaKnown RBP12.44□□□□□ -0.42
GPC1-208ENST00000469694 CCDC74BQ96LY2 380 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 CHRNA9Q9UGM1 479 aa12.44□□□□□ -0.42
GPC1-208ENST00000469694 PRR32B1ATL7 298 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 PHYHO14832 338 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 KCNAB3O43448 404 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 IGKV3-11P04433 115 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 IFI6P09912 130 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 GRPRP30550 384 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 GPX4P36969 197 aaPredicted RBP12.43□□□□□ -0.42
GPC1-208ENST00000469694 EIF2S3P41091 472 aaKnown RBP12.43□□□□□ -0.42
GPC1-208ENST00000469694 F2RL1P55085 397 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 AIMP2Q13155 320 aaKnown RBP12.43□□□□□ -0.42
GPC1-208ENST00000469694 PHF19Q5T6S3 580 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 TMED6Q8WW62 240 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 G6PC3Q9BUM1 346 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 EDEM2Q9BV94 578 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 POLE3Q9NRF9 147 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 TRAV8-7A0A075B6U6 113 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 SERINC4A6NH21 518 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 C4orf47A7E2U8 309 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms