RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TAF9Q16594 264 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SLC25A35Q3KQZ1 300 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 HIKESHIQ53FT3 197 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 KRTCAP3Q53RY4 240 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CT45A2Q5DJT8 189 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MS4A13Q5J8X5 152 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 DCAF12L2Q5VW00 463 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 C9orf57Q5W0N0 161 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 METRNLQ641Q3 311 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 FAM71E1Q6IPT2 247 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PWWP2BQ6NUJ5 590 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 RGMBQ6NW40 437 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF774Q6NX45 483 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 METTL7BQ6UX53 244 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 IL20RBQ6UXL0 311 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 DPPA3Q6W0C5 159 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CLEC20AQ6ZU45 233 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MYPOPQ86VE0 399 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CXorf67Q86X51 503 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MAML2Q8IZL2 1156 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 GABRG1Q8N1C3 465 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF619Q8N2I2 560 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MTURNQ8N3F0 131 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 JAGN1Q8N5M9 183 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 FAM71E2Q8N5Q1 922 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF321PQ8N8H1 164 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MORN4Q8NDC4 146 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 OR5L2Q8NGL0 311 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 OR1N1Q8NGS0 311 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 OR13C4Q8NGS5 318 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 OR13C2Q8NGS9 318 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SYNPRQ8TBG9 265 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 GPR148Q8TDV2 347 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 NPRL2Q8WTW4 380 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 GHSRQ92847 366 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 TVP23CQ96ET8 276 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PGLYRP3Q96LB9 341 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PTPN18Q99952 460 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MIEN1Q9BRT3 115 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MED10Q9BTT4 135 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SUCNR1Q9BXA5 334 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SLC12A9Q9BXP2 914 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 ULBP1Q9BZM6 244 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SLC25A31Q9H0C2 315 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PRO1933Q9H354 126 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 NELFAQ9H3P2 528 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 POFUT1Q9H488 388 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 AUNIPQ9H7T9 357 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CACNG4Q9UBN1 327 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 HSPB7Q9UBY9 170 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SERGEFQ9UGK8 458 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MSRAQ9UJ68 235 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 IKZF2Q9UKS7 526 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SLC7A11Q9UPY5 501 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CLDN16Q9Y5I7 305 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PUS1Q9Y606 427 aaKnown RBP eCLIP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 COL4A1P02462 1669 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 THSD7AQ9UPZ6 1657 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 WDR90Q96KV7 1748 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MYLKQ15746 1914 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 IGLV3-10A0A075B6K4 115 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM272A0A1B0GTI8 110 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PRAMEF25A6NGN4 478 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 OR51F1A6NGY5 319 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 RIIAD1A6NNX1 92 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CLDN34H7C241 214 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 K7ERU9 68 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 HRKO00198 91 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PRAMEF11O60813 436 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 RAMP2O60895 175 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 WDR1O75083 606 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 GJB3O75712 270 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 LRATO95237 230 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CYB5AP00167 134 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PNPP00491 289 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 HLA-AP01891 365 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 HBE1P02100 147 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 OPN1SWP03999 348 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 HSPB1P04792 205 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 IFNA6P05013 189 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CD3EP07766 207 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 MMP3P08254 477 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 HNRNPA1P09651 372 aaKnown RBP eCLIP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 DANCRP0C864 163 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF286BP0CG31 522 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 OR12D1P0DN82 309 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CTSAP10619 480 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CD37P11049 281 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PGAM2P15259 253 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 KCNE1P15382 129 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 BMP5P22003 454 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ZBTB25P24278 435 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CDK2P24941 298 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 OR1E1P30953 314 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 DCTDP32321 178 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 LTBRP36941 435 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 DIO1P49895 249 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 RND2P52198 227 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 UBE2G2P60604 165 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms