RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 GNG8Q9UK08 70 aa7.29□□□□□ -1.24
BRCA1-208ENST00000468300 TRGV5A0A0B4J1U4 118 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 SULT1C4O75897 302 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 TGM4P49221 684 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF45Q02386 682 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF169Q14929 603 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-208ENST00000468300 LIPNQ5VXI9 398 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 C22orf42Q6IC83 251 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 ETFRF1Q6IPR1 90 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 BRICD5Q6PL45 260 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 GDPGP1Q6ZNW5 385 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 CFAP77Q6ZQR2 320 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 CAPSLQ8WWF8 208 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 TMEM45BQ96B21 275 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 SMIM19Q96E16 107 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 OR8B4Q96RC9 309 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 HDHD5Q9BXW7 423 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 PRDM14Q9GZV8 571 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 TRIM36Q9NQ86 728 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 LHX6Q9UPM6 363 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 NBEAQ8NFP9 2946 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 METTL15A6NJ78 407 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 NPIPA2E9PIF3 369 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 NPIPA3F8WFD2 350 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 GABRPO00591 440 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 TGM6O95932 706 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 COX5BP10606 129 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 PSMA1P25786 263 aaKnown RBP7.28□□□□□ -1.24
BRCA1-208ENST00000468300 KCNJ8Q15842 424 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 TBR1Q16650 682 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 SLC18B1Q6NT16 456 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 LINC00346Q8IVM7 164 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 FNDC9Q8TBE3 224 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 SNX33Q8WV41 574 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 GHSRQ92847 366 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 BCO1Q9HAY6 547 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 SLC35D1Q9NTN3 355 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 RCE1Q9Y256 329 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 ZFPL1O95159 310 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 CLEC2LP0C7M8 214 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 KIR3DL2P43630 455 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 CAPZA1P52907 286 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 MFGE8Q08431 387 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-208ENST00000468300 RASGEF1BQ0VAM2 473 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 ENDOGQ14249 297 aaKnown RBP7.28□□□□□ -1.24
BRCA1-208ENST00000468300 PLEKHN1Q494U1 663 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-208ENST00000468300 FAM27D1Q5T7N8 215 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 LRRN1Q6UXK5 716 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 KDF1Q8NAX2 398 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-208ENST00000468300 THEM6Q8WUY1 208 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 NINJ1Q92982 152 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 PPP1R14AQ96A00 147 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 ZHX1-C8orf76Q96EF9 292 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 RBP7Q96R05 134 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 PDCD1LG2Q9BQ51 273 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 EMC7Q9NPA0 242 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 POLE4Q9NR33 117 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 FBXL3Q9UKT7 428 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 RPH3ALQ9UNE2 315 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 SPTBN2O15020 2390 aa7.28□□□□□ -1.24
BRCA1-208ENST00000468300 NCOA6Q14686 2063 aaPredicted RBP7.27□□□□□ -1.24
BRCA1-208ENST00000468300 CD8B2A6NJW9 211 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 HLA-DQA2P01906 255 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 MBP02144 154 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 ADRB1P08588 477 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 SPARCP09486 303 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 CD8BP10966 210 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 OPRL1P41146 370 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 CDC34P49427 236 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-208ENST00000468300 HIST1H3AP68431 136 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 EIF2B1Q14232 305 aaKnown RBP7.27□□□□□ -1.25
BRCA1-208ENST00000468300 HIST2H3PS2Q5TEC6 136 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 RPL22L1Q6P5R6 122 aaKnown RBP7.27□□□□□ -1.25
BRCA1-208ENST00000468300 UNQ9370/PRO34162Q6UXP9 181 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 HIST2H3AQ71DI3 136 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.27□□□□□ -1.25
BRCA1-208ENST00000468300 DCXRQ7Z4W1 244 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 TUSC5Q8IXB3 177 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 ZADH2Q8N4Q0 377 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 OR52N5Q8NH56 324 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 ABHD4Q8TB40 342 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 RNF133Q8WVZ7 376 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 ABHD17AQ96GS6 310 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 RAXQ9Y2V3 346 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 LRP12Q9Y561 859 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 DNAJC13O75165 2243 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 APC2O95996 2303 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 XKRY2A2RUG3 117 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF726A6NNF4 738 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 ACOT7O00154 380 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 IL1AP01583 271 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 KRT8P05787 483 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 MAGEB1P43366 347 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 SLC3A1Q07837 685 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 GUSBP1Q15486 140 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 RSPO1Q2MKA7 263 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-208ENST00000468300 LINC00303Q3SY05 128 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 DNM1P34Q6PK57 102 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 ARL9Q6T311 187 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 HDDC2Q7Z4H3 204 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms