RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
VPS26A-204ENST00000467852 FAM90A1Q86YD7 464 aa9.28□□□□□ -0.92
VPS26A-204ENST00000467852 BHLHE23Q8NDY6 225 aa9.28□□□□□ -0.92
VPS26A-204ENST00000467852 FBXO25Q8TCJ0 367 aa9.28□□□□□ -0.92
VPS26A-204ENST00000467852 AENQ8WTP8 325 aaKnown RBP9.28□□□□□ -0.92
VPS26A-204ENST00000467852 DNAJA4Q8WW22 397 aaPredicted RBP9.28□□□□□ -0.92
VPS26A-204ENST00000467852 H1FXQ92522 213 aaKnown RBP9.28□□□□□ -0.92
VPS26A-204ENST00000467852 SPATA25Q9BR10 227 aa9.28□□□□□ -0.92
VPS26A-204ENST00000467852 TMEM216Q9P0N5 145 aa9.28□□□□□ -0.92
VPS26A-204ENST00000467852 PRPF19Q9UMS4 504 aaKnown RBP9.28□□□□□ -0.92
VPS26A-204ENST00000467852 FIS1Q9Y3D6 152 aa9.28□□□□□ -0.92
VPS26A-204ENST00000467852 NDUFB3O43676 98 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 CPSF4O95639 269 aaKnown RBP9.27□□□□□ -0.93
VPS26A-204ENST00000467852 HCKP08631 526 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 CDC25BP30305 580 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 GUCA1AP43080 201 aaPredicted RBP9.27□□□□□ -0.93
VPS26A-204ENST00000467852 RAD23AP54725 363 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 ALG10BQ5I7T1 473 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 CFAP157Q5JU67 520 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 C10orf128Q5T292 105 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 OR4F3Q6IEY1 312 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 HCP5Q6MZN7 132 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 FBXW12Q6X9E4 464 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 SLC36A1Q7Z2H8 476 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 LRRC34Q8IZ02 419 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 OR5L1Q8NGL2 311 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 NABP1Q96AH0 204 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 ITCHQ96J02 903 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 SELENONQ9NZV5 590 aa9.27□□□□□ -0.93
VPS26A-204ENST00000467852 A0A1W2PQ09 198 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 IQCF6A8MYZ5 107 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 CENPBD1B2RD01 187 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 LRRN3E7EW58 273 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 H0YAE9 185 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 MT-ATP6P00846 226 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 CST2P09228 141 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 COX5BP10606 129 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 SERPINB9P50453 376 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 TXNL4AP83876 142 aaKnown RBP9.26□□□□□ -0.93
VPS26A-204ENST00000467852 ZNF260Q3ZCT1 412 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 LRRC10Q5BKY1 277 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 FAM27D1Q5T7N8 215 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 RNF165Q6ZSG1 346 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 FRMD7Q6ZUT3 714 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 OR2W3Q7Z3T1 314 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 ARMC8Q8IUR7 673 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 RIMKLAQ8IXN7 391 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 NOXO1Q8NFA2 376 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 RASD2Q96D21 266 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 PPP3R2Q96LZ3 170 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 CCL13Q99616 98 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 SLC35A5Q9BS91 424 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 DPH5Q9H2P9 285 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 ZFP57Q9NU63 452 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 PTTG3PQ9NZH4 202 aa9.26□□□□□ -0.93
VPS26A-204ENST00000467852 MRPL15Q9P015 296 aaKnown RBP9.26□□□□□ -0.93
VPS26A-204ENST00000467852 PKHD1P08F94 4074 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 IGHV3OR15-7A0A075B7D8 119 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 A0A1B0GWA3 101 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 CCL24O00175 119 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 AZIN1O14977 448 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 SLC2A10O95528 541 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 LAP3P28838 519 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 CEBPDP49716 269 aaPredicted RBP9.25□□□□□ -0.93
VPS26A-204ENST00000467852 ZNF133P52736 654 aaPredicted RBP9.25□□□□□ -0.93
VPS26A-204ENST00000467852 SLC7A5Q01650 507 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 NFYCQ13952 458 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 MICBQ29980 383 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 HHATQ5VTY9 493 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 ULK3Q6PHR2 472 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 C18orf65Q6ZTR6 163 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 SLC30A8Q8IWU4 369 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 LSMEM1Q8N8F7 131 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 SLC35B4Q969S0 331 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 LYZL4Q96KX0 146 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 DUX3Q96PT4 197 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 C1orf50Q9BV19 199 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 MRPL13Q9BYD1 178 aaKnown RBP9.25□□□□□ -0.93
VPS26A-204ENST00000467852 TUBB1Q9H4B7 451 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 HEXA-AS1Q9H8Q6 139 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 LIN7BQ9HAP6 207 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 TAS2R5Q9NYW4 299 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 CALML5Q9NZT1 146 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 AURKCQ9UQB9 309 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 UGT2A1Q9Y4X1 527 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 LYVE1Q9Y5Y7 322 aa9.25□□□□□ -0.93
VPS26A-204ENST00000467852 A0A1B0GWJ7 208 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 MCIDASD6RGH6 385 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 PEX11AO75192 247 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 LPLP06858 475 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 DUX4L4P0CJ87 422 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 POU1F1P28069 291 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 PHBP35232 272 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 INSL3P51460 131 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 IKZF1Q13422 519 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 KIAA2026Q5HYC2 2103 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 BEND6Q5SZJ8 279 aaPredicted RBP9.24□□□□□ -0.93
VPS26A-204ENST00000467852 TEX36Q5VZQ5 186 aa9.24□□□□□ -0.93
VPS26A-204ENST00000467852 FAM91A1Q658Y4 838 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms