RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 PRR27Q6MZM9 219 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 PWWP2BQ6NUJ5 590 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 RGMBQ6NW40 437 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 XKRXQ6PP77 449 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 SMARCD3Q6STE5 483 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 CASP12Q6UXS9 341 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.97□□□□□ -1.61
LRCH3-212ENST00000466845 ASCL5Q7RTU5 278 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 PIWIL4Q7Z3Z4 852 aaKnown RBP4.97□□□□□ -1.61
LRCH3-212ENST00000466845 RNF144BQ7Z419 303 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 COMMD7Q86VX2 200 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 CHSY1Q86X52 802 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 DHRSXQ8N5I4 330 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-212ENST00000466845 PNLDC1Q8NA58 520 aaKnown RBP4.97□□□□□ -1.61
LRCH3-212ENST00000466845 OR1F12Q8NHA8 337 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 GNPDA2Q8TDQ7 276 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 RNF138Q8WVD3 245 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 RAB39BQ96DA2 213 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 NARS2Q96I59 477 aaKnown RBP4.97□□□□□ -1.61
LRCH3-212ENST00000466845 SLC6A7Q99884 636 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 CCDC32Q9BV29 185 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 TBL1XR1Q9BZK7 514 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 CHST5Q9GZS9 411 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 NAA50Q9GZZ1 169 aaKnown RBP4.97□□□□□ -1.61
LRCH3-212ENST00000466845 LHPPQ9H008 270 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 BPIFA1Q9NP55 256 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 FGF21Q9NSA1 209 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 FBXL4Q9UKA2 621 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 RPL26L1Q9UNX3 145 aaKnown RBP4.97□□□□□ -1.61
LRCH3-212ENST00000466845 BAIAP2Q9UQB8 552 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 TIMM10BQ9Y5J6 103 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 CEP350Q5VT06 3117 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 MYH3P11055 1940 aa4.97□□□□□ -1.61
LRCH3-212ENST00000466845 SLC22A20A6NK97 555 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 ZNF878C9JN71 531 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 PPP5D1E7EU14 171 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 BLOC1S5-TXNDC5H3BN57 136 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 PLPP3O14495 311 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 DUSP11O75319 330 aaKnown RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 NDUFA7O95182 113 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 IGHG3P01860 377 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 HLA-AP01891 365 aaKnown RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 HLA-HP01893 362 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 RLN2P04090 185 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 TSPAN19P0C672 248 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 OR8U8P0C7N1 319 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 HOXB2P14652 356 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 GPX2P18283 190 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 RPS12P25398 132 aaKnown RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 CD1CP29017 333 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 CTGFP29279 349 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 RFC3P40938 356 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 GPR1P46091 355 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 DNASE1L1P49184 302 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 FUT6P51993 359 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 PAX9P55771 341 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 CLDN2P57739 230 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 CKS1BP61024 79 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 RPL26P61254 145 aaKnown RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 RHOAP61586 193 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 STXBP1P61764 594 aaKnown RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 RRAS2P62070 204 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 RPS15AP62244 130 aaKnown RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 FKBP1BP68106 108 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 MRPS34P82930 218 aaKnown RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 ZXDBP98169 803 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 HSF1Q00613 529 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 PAX2Q02962 417 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 CFHR1Q03591 330 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 C1orf61Q13536 156 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 KIAA0141Q14154 515 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 SURF2Q15527 256 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 OR1Q1Q15612 314 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 CDKN3Q16667 212 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 RPEL1Q2QD12 228 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 SPIN4Q56A73 249 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 TMEM268Q5VZI3 342 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 FAM166AQ6J272 317 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 KIRREL2Q6UWL6 708 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 ZNF517Q6ZMY9 492 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 ZNF66Q6ZN08 573 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 MEPCEQ7L2J0 689 aaKnown RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 SSX6Q7RTT6 188 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 PRSS45Q7RTY3 260 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 OR2W3Q7Z3T1 314 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 GLCCI1Q86VQ1 547 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 MARCH9Q86YJ5 346 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 UEVLDQ8IX04 471 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 DAW1Q8N136 415 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 C12orf45Q8N5I9 185 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-212ENST00000466845 OR52I1Q8NGK6 324 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 OR4P4Q8NGL7 312 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 OR6M1Q8NGM8 313 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 OR1P1Q8NH06 330 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 OR8U1Q8NH10 309 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 CCDC107Q8WV48 283 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 TNFAIP8L1Q8WVP5 186 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 SGK494Q96LW2 274 aa4.96□□□□□ -1.62
LRCH3-212ENST00000466845 AGAP4Q96P64 663 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms