RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ZNF205O95201 554 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 CYB5R3P00387 301 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-206ENST00000466532 RENP00797 406 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 RPS2P15880 293 aaKnown RBP16.07■□□□□ 0.16
COL9A3-206ENST00000466532 EGR1P18146 543 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 SLC6A6P31641 620 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 COX10Q12887 443 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 DOK3Q7L591 496 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 BCL6BQ8N143 479 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-206ENST00000466532 OR6V1Q8N148 313 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 SGMS2Q8NHU3 365 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 NMNAT3Q96T66 252 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 SLC30A2Q9BRI3 323 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 OR52D1Q9H346 318 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 WDR76Q9H967 626 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 IQCF6A8MYZ5 107 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 F5H5P2 479 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 GADD45GO95257 159 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 WNT2P09544 360 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 SMIM11AP58511 58 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 SPIBQ01892 262 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 DBPQ10586 325 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-206ENST00000466532 TUSC1Q2TAM9 212 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 RFX4Q33E94 735 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 MOGAT3Q86VF5 341 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 LINC00346Q8IVM7 164 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 SLC26A10Q8NG04 563 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 OR4K13Q8NH42 304 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 DUX5Q96PT3 197 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 ELAC2Q9BQ52 826 aaKnown RBP16.06■□□□□ 0.16
COL9A3-206ENST00000466532 SSBP3Q9BWW4 388 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-206ENST00000466532 HCAR1Q9BXC0 346 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 MYLK2Q9H1R3 596 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 GORASP2Q9H8Y8 452 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 TMEM165Q9HC07 324 aa16.06■□□□□ 0.16
COL9A3-206ENST00000466532 DNAJC9-AS1A6NH13 148 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 ARPC3O15145 178 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 HIST1H1CP16403 213 aaKnown RBP16.05■□□□□ 0.16
COL9A3-206ENST00000466532 PRTN3P24158 256 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 PRDX6P30041 224 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 CD80P33681 288 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 GNB2P62879 340 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 FOXL1Q12952 345 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 RSPO1Q2MKA7 263 aaPredicted RBP16.05■□□□□ 0.16
COL9A3-206ENST00000466532 SLC18B1Q6NT16 456 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 CFAP77Q6ZQR2 320 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 KLBQ86Z14 1044 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 PYURFQ96I23 114 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 IFT27Q9BW83 186 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 C1QTNF5Q9BXJ0 243 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 RPRD1BQ9NQG5 326 aaKnown RBP16.05■□□□□ 0.16
COL9A3-206ENST00000466532 TMEM100Q9NV29 134 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 MIOXQ9UGB7 285 aa16.05■□□□□ 0.16
COL9A3-206ENST00000466532 LRRC30A6NM36 301 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 F5H5K5 113 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 OR10H3O60404 316 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 SEMG1P04279 462 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 HLA-DPB1P04440 258 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 ACSM4P0C7M7 580 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 HKR1P10072 659 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 SELEP16581 610 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 CPT2P23786 658 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 FPR3P25089 353 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 NOS3P29474 1203 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 PRSS12P56730 875 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 PAX8Q06710 450 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 BAMBIQ13145 260 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 ZNF181Q2M3W8 571 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 SLC36A3Q495N2 470 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 BTNL3Q6UXE8 466 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 COLCA1Q6ZS62 124 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 C1orf87Q8N0U7 546 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 OR52E2Q8NGJ4 325 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 OR2AJ1Q8NGZ0 328 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 NEIL1Q96FI4 390 aaPredicted RBP16.04■□□□□ 0.16
COL9A3-206ENST00000466532 ZNF48Q96MX3 618 aaPredicted RBP16.04■□□□□ 0.16
COL9A3-206ENST00000466532 PITX2Q99697 317 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 ATF6BQ99941 703 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 TMEM246Q9BRR3 403 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 CDADC1Q9BWV3 514 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 MS4A7Q9GZW8 240 aaPredicted RBP16.04■□□□□ 0.16
COL9A3-206ENST00000466532 FN3KQ9H479 309 aa16.04■□□□□ 0.16
COL9A3-206ENST00000466532 ZMAT3Q9HA38 289 aaKnown RBP16.04■□□□□ 0.16
COL9A3-206ENST00000466532 HLA-DQA2P01906 255 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 PAX2Q02962 417 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 ECH1Q13011 328 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 GK2Q14410 553 aaPredicted RBP16.03■□□□□ 0.16
COL9A3-206ENST00000466532 KRTAP27-1Q3LI81 207 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 ZNF404Q494X3 552 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 LRRN1Q6UXK5 716 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 ZBTB46Q86UZ6 589 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 PARP8Q8N3A8 854 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 SDR9C7Q8NEX9 313 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 MCUR1Q96AQ8 359 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 PLEKHA8Q96JA3 519 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 C1orf147Q96MC9 270 aaPredicted RBP16.03■□□□□ 0.16
COL9A3-206ENST00000466532 MAGEL2Q9UJ55 1249 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 PCDHGB1Q9Y5G3 927 aa16.03■□□□□ 0.16
COL9A3-206ENST00000466532 IGHV3OR16-10A0A075B7F0 116 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms