RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 SULT1C2O00338 296 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 IGHG1P01857 330 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 AMY2AP04746 511 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 ITGB2P05107 769 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 SLC2A1P11166 492 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 ZNF35P13682 527 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 PRKXP51817 358 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 DHODHQ02127 395 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 SSBP1Q04837 148 aaKnown RBP7.94□□□□□ -1.14
SYNE1-217ENST00000466159 CHMP1BQ7LBR1 199 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 RNF144BQ7Z419 303 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 NKAIN3Q8N8D7 197 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 TMEM229BQ8NBD8 167 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 NOXO1Q8NFA2 376 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 OR51E1Q8TCB6 317 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 TNFAIP8L1Q8WVP5 186 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 ARPC5LQ9BPX5 153 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 SLC26A1Q9H2B4 701 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 GAREM1Q9H706 876 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 UBQLN2Q9UHD9 624 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 OPN4Q9UHM6 478 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 FARSAQ9Y285 508 aaKnown RBP7.94□□□□□ -1.14
SYNE1-217ENST00000466159 POLR1DQ9Y2S0 133 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 CHCHD2Q9Y6H1 151 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-217ENST00000466159 NCOA6Q14686 2063 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-217ENST00000466159 TMEM265A0A087WTH1 108 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 MCRIP1C9JLW8 97 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 L7N2F9 121 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 RAB27BO00194 218 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 CYB5AP00167 134 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 CSN2P05814 226 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 CLDN6P56747 220 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 GPR85P60893 370 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 UNC119Q13432 240 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 PMS2CLQ68D20 193 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 TMED4Q7Z7H5 227 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 OR1M1Q8NGA1 313 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 OR4K17Q8NGC6 315 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 OR13C9Q8NGT0 318 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 IFI44Q8TCB0 444 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 ELP5Q8TE02 316 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 PNPLA2Q96AD5 504 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 SFXN2Q96NB2 322 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 SPACA5Q96QH8 159 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 SCPEP1Q9HB40 452 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 ASH2LQ9UBL3 628 aa7.94□□□□□ -1.14
SYNE1-217ENST00000466159 A0A1B0GTI1 187 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 TEX51A0A1B0GUA7 166 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 ZNF736B4DX44 427 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-217ENST00000466159 RER1O15258 196 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 RGS11O94810 467 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 CFIP05156 583 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 ZNF735P0CB33 412 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 ZNF43P17038 809 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 HSD11B1P28845 292 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 IKZF1Q13422 519 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 PCOLCEQ15113 449 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 SCGB2B2Q4G0G5 96 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 SIGIRRQ6IA17 410 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 RTN4RL2Q86UN3 420 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 OR2AJ1Q8NGZ0 328 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 MAFAQ8NHW3 353 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-217ENST00000466159 FOXRED1Q96CU9 486 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-217ENST00000466159 ZNF319Q9P2F9 582 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 RAB22AQ9UL26 194 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 MAB21L2Q9Y586 359 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 A0A0A6YYH2 397 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 TMEM82A0PJX8 343 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 A6NJ64 397 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 F5H5P2 479 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 ARPC5O15511 151 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 QDPRP09417 244 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 OR4E1P0C645 316 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 VSIG8P0DPA2 414 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 ABOP16442 354 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 QRFPP83859 136 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 NKPD1Q17RQ9 610 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 ZNF260Q3ZCT1 412 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 SLC22A6Q4U2R8 563 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 CLLU1Q5K131 121 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 SFRP5Q5T4F7 317 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 C11orf88Q6PI97 169 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 SLC25A47Q6Q0C1 308 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 C17orf107Q6ZR85 190 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 CD163Q86VB7 1156 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 BPIFB2Q8N4F0 458 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 GVQW1Q8N7I0 195 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 FADS6Q8N9I5 356 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 CHST4Q8NCG5 386 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 OR5D14Q8NGL3 314 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 AQP3Q92482 292 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 NAT6Q93015 286 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 PTX4Q96A99 478 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 OXGR1Q96P68 337 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 SLC6A7Q99884 636 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 TMPRSS13Q9BYE2 586 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 PISDQ9UG56 409 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 SLC5A6Q9Y289 635 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 AUP1Q9Y679 476 aa7.93□□□□□ -1.14
SYNE1-217ENST00000466159 FXYD6-FXYD2A0A087WZ82 144 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms