RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 PYURFQ96I23 114 aa17.5■□□□□ 0.39
CSPG5-204ENST00000465441 NMNAT3Q96T66 252 aa17.5■□□□□ 0.39
CSPG5-204ENST00000465441 SLC30A2Q9BRI3 323 aa17.5■□□□□ 0.39
CSPG5-204ENST00000465441 HDHD2Q9H0R4 259 aa17.5■□□□□ 0.39
CSPG5-204ENST00000465441 OR52D1Q9H346 318 aa17.5■□□□□ 0.39
CSPG5-204ENST00000465441 WDR76Q9H967 626 aa17.5■□□□□ 0.39
CSPG5-204ENST00000465441 SPAG4Q9NPE6 437 aa17.5■□□□□ 0.39
CSPG5-204ENST00000465441 IGHV3-64DA0A0J9YX35 117 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 IQCF6A8MYZ5 107 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 IFNL4K9M1U5 179 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 ARPC3O15145 178 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 MLNRO43193 412 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 SPRY1O43609 319 aaPredicted RBP17.49■□□□□ 0.39
CSPG5-204ENST00000465441 CD80P33681 288 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 PMELP40967 661 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 SRP9P49458 86 aaKnown RBP17.49■□□□□ 0.39
CSPG5-204ENST00000465441 COX10Q12887 443 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 COLCA1Q6ZS62 124 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 DOK3Q7L591 496 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 NAA40Q86UY6 237 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 OR4K13Q8NH42 304 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 MRI1Q9BV20 369 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 TMEM100Q9NV29 134 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 V9GYQ6 96 aa17.49■□□□□ 0.39
CSPG5-204ENST00000465441 F5H5P2 479 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 ATP8B1O43520 1251 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 GADD45GO95257 159 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 RENP00797 406 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 HIST1H1CP16403 213 aaKnown RBP17.48■□□□□ 0.39
CSPG5-204ENST00000465441 PRDX6P30041 224 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 SLC6A6P31641 620 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 SMIM11AP58511 58 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 KRTAP27-1Q3LI81 207 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 JAZF1Q86VZ6 243 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 LINC00346Q8IVM7 164 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 BHLHE23Q8NDY6 225 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 SLC26A10Q8NG04 563 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 SGMS2Q8NHU3 365 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 ZNF48Q96MX3 618 aaPredicted RBP17.48■□□□□ 0.39
CSPG5-204ENST00000465441 DUX5Q96PT3 197 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 C1QTNF5Q9BXJ0 243 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 LRCH1Q9Y2L9 728 aa17.48■□□□□ 0.39
CSPG5-204ENST00000465441 F5H5K5 113 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 SEMG1P04279 462 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 HLA-DPB1P04440 258 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 HKR1P10072 659 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 CPT2P23786 658 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 PRTN3P24158 256 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 PRSS12P56730 875 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 SPIBQ01892 262 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 PAX2Q02962 417 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 FAM201AQ5SY85 155 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 SLC18B1Q6NT16 456 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 CFAP77Q6ZQR2 320 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 ZBTB46Q86UZ6 589 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 MOGAT3Q86VF5 341 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 KLBQ86Z14 1044 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 FANK1Q8TC84 345 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 PITX2Q99697 317 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 TMEM246Q9BRR3 403 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 CDADC1Q9BWV3 514 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 RPRD1BQ9NQG5 326 aaKnown RBP17.47■□□□□ 0.39
CSPG5-204ENST00000465441 MIOXQ9UGB7 285 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 OR5V1Q9UGF6 321 aa17.47■□□□□ 0.39
CSPG5-204ENST00000465441 OR6C68A6NDL8 312 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 OR10H3O60404 316 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 ACSM4P0C7M7 580 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 SELEP16581 610 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 FPR3P25089 353 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 MSX2P35548 267 aaPredicted RBP17.46■□□□□ 0.39
CSPG5-204ENST00000465441 FOXL1Q12952 345 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 ZNF181Q2M3W8 571 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 SLC36A3Q495N2 470 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 C1orf147Q96MC9 270 aaPredicted RBP17.46■□□□□ 0.39
CSPG5-204ENST00000465441 IFT27Q9BW83 186 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 SSBP3Q9BWW4 388 aaPredicted RBP17.46■□□□□ 0.39
CSPG5-204ENST00000465441 HCAR1Q9BXC0 346 aa17.46■□□□□ 0.39
CSPG5-204ENST00000465441 TENM1Q9UKZ4 2725 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 A0A1B0GWJ7 208 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 RPS2P15880 293 aaKnown RBP17.45■□□□□ 0.38
CSPG5-204ENST00000465441 GGT2P36268 569 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 GNB2P62879 340 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 BAMBIQ13145 260 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 MAB21L1Q13394 359 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 GK2Q14410 553 aaPredicted RBP17.45■□□□□ 0.38
CSPG5-204ENST00000465441 SDR9C7Q8NEX9 313 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 OR52E2Q8NGJ4 325 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 OR2AJ1Q8NGZ0 328 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 RAB40AQ8WXH6 277 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 SLCO4A1Q96BD0 722 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 NEIL1Q96FI4 390 aaPredicted RBP17.45■□□□□ 0.38
CSPG5-204ENST00000465441 MS4A7Q9GZW8 240 aaPredicted RBP17.45■□□□□ 0.38
CSPG5-204ENST00000465441 FN3KQ9H479 309 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 PNRC2Q9NPJ4 139 aaKnown RBP17.45■□□□□ 0.38
CSPG5-204ENST00000465441 CYB5R1Q9UHQ9 305 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 PCDHGB1Q9Y5G3 927 aa17.45■□□□□ 0.38
CSPG5-204ENST00000465441 SOX21Q9Y651 276 aaPredicted RBP17.45■□□□□ 0.38
CSPG5-204ENST00000465441 IGHV3OR16-10A0A075B7F0 116 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 DNAJC9-AS1A6NH13 148 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 FSTL3O95633 263 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms