RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	TMEM269	A0A1B0GVZ9	245 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	C5orf49	A4QMS7	147 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	LOC110117498-PIK3R3	F6TDL0	507 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155		M0R135	149 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	SRSF10	O75494	262 aa	Known RBP	11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	PNP	P00491	289 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	COX5B	P10606	129 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	SLC2A1	P11166	492 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	CCNO	P22674	350 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	OTX1	P32242	354 aa	Predicted RBP	11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	APLNR	P35414	380 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	RPL5	P46777	297 aa	Known RBP	11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	ALDH3B2	P48448	385 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	TPTE	P56180	551 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	TAS2R43	P59537	309 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	PSMA6	P60900	246 aa	Known RBP	11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	BDH1	Q02338	343 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	TFF3	Q07654	80 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	MFGE8	Q08431	387 aa	Predicted RBP	11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	MRPL28	Q13084	256 aa	Known RBP	11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	TST	Q16762	297 aa	Known RBP	11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	SLC30A7	Q8NEW0	376 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	HAVCR2	Q8TDQ0	301 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	TMIGD2	Q96BF3	282 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	ZNF799	Q96GE5	643 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	ZC3HAV1L	Q96H79	300 aa	Known RBP	11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	DOK1	Q99704	481 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	ISYNA1	Q9NPH2	558 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	ST6GALNAC2	Q9UJ37	374 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	N6AMT1	Q9Y5N5	214 aa		11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.64	□□□□□ -0.55
ATF3-208	ENST00000465155	TRBV2	A0A0J9YWF9	115 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	ANXA2	P07355	339 aa	Known RBP	11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	ACSM4	P0C7M7	580 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	PPP3CB	P16298	524 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	CEL	P19835	753 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	TGM4	P49221	684 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	GDI2	P50395	445 aa	Known RBP	11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	MMP16	P51512	607 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	ZNF83	P51522	516 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	ZNF121	P58317	390 aa	Predicted RBP	11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	NANOS3	P60323	173 aa	Known RBP	11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	HGFAC	Q04756	655 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	BLMH	Q13867	455 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	SNTB1	Q13884	538 aa	Known RBP	11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	CDK5R1	Q15078	307 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	TBC1D28	Q2M2D7	210 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	KRTAP27-1	Q3LI81	207 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	CCDC58	Q4VC31	144 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	C1QTNF12	Q5T7M4	302 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	LIPK	Q5VXJ0	399 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	RPL22L1	Q6P5R6	122 aa	Known RBP	11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	NAA40	Q86UY6	237 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	UFD1	Q92890	307 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	POM121L2	Q96KW2	1035 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	WFIKKN1	Q96NZ8	548 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	MED18	Q9BUE0	208 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	MOV10	Q9HCE1	1003 aa	Known RBP	11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	FAM206A	Q9NX38	181 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	FRRS1L	Q9P0K9	344 aa		11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	CRNN	Q9UBG3	495 aa	Predicted RBP	11.63	□□□□□ -0.55
ATF3-208	ENST00000465155	IGHV1-18	A0A0C4DH31	117 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155		M0R1B8	84 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	OGG1	O15527	345 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	IGLV1-44	P01699	117 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	APOC1	P02654	83 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	CPE	P16870	476 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	PAX7	P23759	505 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	LIPA	P38571	399 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	SLC3A1	Q07837	685 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	ALKBH1	Q13686	389 aa	Known RBP	11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	WDR38	Q5JTN6	314 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	ZNF544	Q6NX49	715 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	FDX2	Q6P4F2	183 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	ARL9	Q6T311	187 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	DRAM2	Q6UX65	266 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	CATSPERD	Q86XM0	798 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	WFDC8	Q8IUA0	241 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	PRSS35	Q8N3Z0	413 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	FAM169B	Q8N8A8	192 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	OR2G2	Q8NGZ5	317 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	PPP1R14A	Q96A00	147 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	G6PC2	Q9NQR9	355 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	NPAP1	Q9NZP6	1156 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	OR52A1	Q9UKL2	312 aa		11.62	□□□□□ -0.55
ATF3-208	ENST00000465155	PRR14L	Q5THK1	2151 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	CCRL2	O00421	344 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	THBD	P07204	575 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	CECR9	P0C854	216 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	KIR3DL2	P43630	455 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	RGS6	P49758	472 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	SORD	Q00796	357 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	TPBG	Q13641	420 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	SSX1	Q16384	188 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	ODF4	Q2M2E3	257 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	BCL2L15	Q5TBC7	163 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	DMRTA1	Q5VZB9	504 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	DMKN	Q6E0U4	476 aa	Predicted RBP	11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	SEZ6L2	Q6UXD5	910 aa		11.61	□□□□□ -0.55
ATF3-208	ENST00000465155	FAM57B	Q71RH2	274 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms