RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 RAD51Q06609 339 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 ART3Q13508 389 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 TCEAL5Q5H9L2 206 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 ZNF695Q8IW36 515 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 C8orf31Q8N9H6 132 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 OR11H7Q8NGC8 314 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 OR56A4Q8NGH8 313 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 OR52E5Q8NH55 327 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 SYNPRQ8TBG9 265 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 FRZBQ92765 325 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 TCEAL3Q969E4 200 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 DCPSQ96C86 337 aaKnown RBP2.46□□□□□ -2.02
CLK1-208ENST00000464454 NRBF2Q96F24 287 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 OPALINQ96PE5 141 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 LYRM4Q9HD34 91 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 ACP6Q9NPH0 428 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 NECAP2Q9NVZ3 263 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 MTFP1Q9UDX5 166 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 RCL1Q9Y2P8 373 aaKnown RBP2.46□□□□□ -2.02
CLK1-208ENST00000464454 NUP214P35658 2090 aaPredicted RBP2.46□□□□□ -2.02
CLK1-208ENST00000464454 PLEKHG2Q9H7P9 1386 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 CABIN1Q9Y6J0 2220 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 DOCK9Q9BZ29 2069 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 A0A0U1RQV1 116 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 A0A1W2PRD5 423 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 TMEM223A0PJW6 202 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 NCF1BA6NI72 391 aaPredicted RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 SYCE1LA8MT33 242 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 ZNF705GA8MUZ8 300 aaPredicted RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 NCF1CA8MVU1 366 aaPredicted RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 CASC3O15234 703 aaKnown RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 RAD51BO15315 384 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 GCM2O75603 506 aaPredicted RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 IFNW1P05000 195 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 OR56A5P0C7T3 313 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 STAG3L3P0CL85 134 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 MAGEA1P43355 309 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 RPS5P46782 204 aaKnown RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 CDKN2DP55273 166 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 SYNJ2BPP57105 145 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 ZNF121P58317 390 aaPredicted RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 DGCR6Q14129 220 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 ZNF266Q14584 549 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 SNRNP35Q16560 246 aaKnown RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 SMUG1Q53HV7 270 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 C5orf47Q569G3 176 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 SNX20Q7Z614 316 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 TMCO2Q7Z6W1 182 aaPredicted RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 WDR86Q86TI4 376 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 CBLN2Q8IUK8 224 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 APRG1Q8IVJ8 170 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 C11orf72Q8NBR9 251 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 OR8U1Q8NH10 309 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 PEX13Q92968 403 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 PTX4Q96A99 478 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 NARS2Q96I59 477 aaKnown RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 HSD17B10Q99714 261 aaKnown RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 CALN1Q9BXU9 219 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 MED4Q9NPJ6 270 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 MYEF2Q9P2K5 600 aaKnown RBP2.45□□□□□ -2.02
CLK1-208ENST00000464454 PALLDQ8WX93 1383 aa2.45□□□□□ -2.02
CLK1-208ENST00000464454 TTC41PQ6P2S7 1318 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 SLIT3O75094 1523 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 TRAV19A0A0A6YYK7 116 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 TMEM120BA0PK00 339 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 BPY2O14599 106 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 BCKDKO14874 412 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 RBFOX2O43251 390 aaKnown RBP eCLIP2.44□□□□□ -2.02
CLK1-208ENST00000464454 APCSP02743 223 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 ADRA2AP08913 450 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 RAB4AP20338 218 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 RFC3P40938 356 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 RBM34P42696 430 aaKnown RBP2.44□□□□□ -2.02
CLK1-208ENST00000464454 CLDN18P56856 261 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 UBE2MP61081 183 aaKnown RBP2.44□□□□□ -2.02
CLK1-208ENST00000464454 TRMT5Q32P41 509 aaKnown RBP2.44□□□□□ -2.02
CLK1-208ENST00000464454 ZNF684Q5T5D7 378 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 Q5W150 140 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 PLCXD3Q63HM9 321 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 TMEM205Q6UW68 189 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 BHLHA15Q7RTS1 189 aaPredicted RBP2.44□□□□□ -2.02
CLK1-208ENST00000464454 GLYATL2Q8WU03 294 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 RGP1Q92546 391 aaPredicted RBP2.44□□□□□ -2.02
CLK1-208ENST00000464454 FLYWCH2Q96CP2 140 aaKnown RBP2.44□□□□□ -2.02
CLK1-208ENST00000464454 C9orf72Q96LT7 481 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 ZNF317Q96PQ6 595 aaPredicted RBP2.44□□□□□ -2.02
CLK1-208ENST00000464454 SPIN2AQ99865 258 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 SPIN2BQ9BPZ2 258 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 ZDHHC4Q9NPG8 344 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 PXMP2Q9NR77 195 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 DDX18Q9NVP1 670 aaKnown RBP2.44□□□□□ -2.02
CLK1-208ENST00000464454 SLC39A1Q9NY26 324 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 PSME2Q9UL46 239 aa2.44□□□□□ -2.02
CLK1-208ENST00000464454 GAKO14976 1311 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 PHLPP2Q6ZVD8 1323 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 PTPRTO14522 1441 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 IGHV1OR15-9A0A0B4J2B8 117 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 IGKV6-21A0A0C4DH24 114 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 A0A0J9YXV3 536 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 A0A1B0GTQ1 180 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms