RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PPP1R14AQ96A00 147 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 CGREF1Q99674 301 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 CCDC28BQ9BUN5 200 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 HCAR1Q9BXC0 346 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 SIRPDQ9H106 197 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 KAT8Q9H7Z6 458 aaKnown RBP11.97□□□□□ -0.49
SMC1A-204ENST00000463684 GRHPRQ9UBQ7 328 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 NDUFAF1Q9Y375 327 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 OR6C6A6NF89 314 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 XKRYO14609 159 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 ADAM20O43506 726 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 SHOX2O60902 331 aaPredicted RBP11.96□□□□□ -0.49
SMC1A-204ENST00000463684 FAM20BO75063 409 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 DBHP09172 617 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 TNFRSF1BP20333 461 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 FUT4P22083 530 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 SLC18A1P54219 525 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 LOXL3P58215 753 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 VMACQ2NL98 169 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 ANKDD1AQ495B1 522 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 SFRP4Q6FHJ7 346 aaPredicted RBP11.96□□□□□ -0.49
SMC1A-204ENST00000463684 CCDC80Q76M96 950 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 OAFQ86UD1 273 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 PDZD9Q8IXQ8 264 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 GALNT4Q8N4A0 578 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 LRRC75AQ8NAA5 344 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 OR10A6Q8NH74 314 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 ZNF583Q96ND8 569 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 RABEP2Q9H5N1 569 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 TRIM36Q9NQ86 728 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 UFSP2Q9NUQ7 469 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 RNF7Q9UBF6 113 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 CTSZQ9UBR2 303 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 ATPIF1Q9UII2 106 aa11.96□□□□□ -0.49
SMC1A-204ENST00000463684 TRAV27A0A087WT01 109 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 ANKRD61A6NGH8 418 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 ANGPT2O15123 496 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 NDUFA2O43678 99 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 AHCYL1O43865 530 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 FBP1P09467 338 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 IFNA8P32881 189 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 RPL4P36578 427 aaKnown RBP11.95□□□□□ -0.5
SMC1A-204ENST00000463684 LSM6P62312 80 aaKnown RBP11.95□□□□□ -0.5
SMC1A-204ENST00000463684 ST3GAL3Q11203 375 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 COX10Q12887 443 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 MAB21L1Q13394 359 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 HERPUD1Q15011 391 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 OR8B8Q15620 311 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 CCDC92Q53HC0 331 aaPredicted RBP11.95□□□□□ -0.5
SMC1A-204ENST00000463684 MICU2Q8IYU8 434 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 BOLLQ8N9W6 283 aaKnown RBP11.95□□□□□ -0.5
SMC1A-204ENST00000463684 NPRL2Q8WTW4 380 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 ECSITQ9BQ95 431 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 EBF4Q9BQW3 602 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 RERGLQ9H628 205 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 WDR76Q9H967 626 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 FN3KRPQ9HA64 309 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 VPREB3Q9UKI3 123 aa11.95□□□□□ -0.5
SMC1A-204ENST00000463684 TRAV38-1A0A0B4J264 116 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 TEX13CA0A0J9YWL9 993 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 A0A1B0GWJ7 208 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 LGALS8O00214 317 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 RER1O15258 196 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 GPR37O15354 613 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 ECDO95905 644 aaPredicted RBP11.94□□□□□ -0.5
SMC1A-204ENST00000463684 IFNA14P01570 189 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 CD200P41217 278 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 OR1E2P47887 323 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 CRYBA2P53672 197 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 NFYCQ13952 458 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 C11orf91Q3C1V1 193 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 CLEC12AQ5QGZ9 265 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 PRAMEF6Q5VXH4 476 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 SLC35E4Q6ICL7 350 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 BTN2A1Q7KYR7 527 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 GLB1L2Q8IW92 636 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 DPP10Q8N608 796 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 RASSF4Q9H2L5 321 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 CNTD2Q9H8S5 307 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 FBLN5Q9UBX5 448 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 POLR1DQ9Y2S0 133 aa11.94□□□□□ -0.5
SMC1A-204ENST00000463684 A0A1B0GVI7 797 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 PRSS37A4D1T9 235 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 EFCAB9A8MZ26 197 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 SLC16A7O60669 478 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 KHDRBS3O75525 346 aaKnown RBP11.93□□□□□ -0.5
SMC1A-204ENST00000463684 CTLA4P16410 223 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 GABRA5P31644 462 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 RAD23AP54725 363 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 OR8G1Q15617 311 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 MPPED2Q15777 294 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 CDONQ4KMG0 1287 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 VAX1Q5SQQ9 334 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 BEND6Q5SZJ8 279 aaPredicted RBP11.93□□□□□ -0.5
SMC1A-204ENST00000463684 OTPQ5XKR4 325 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 VMO1Q7Z5L0 202 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 GJC3Q8NFK1 279 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 SPRYD4Q8WW59 207 aaPredicted RBP11.93□□□□□ -0.5
SMC1A-204ENST00000463684 SGCDQ92629 289 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms