RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 HLXQ14774 488 aaPredicted RBP17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 ZNF181Q2M3W8 571 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 TUSC1Q2TAM9 212 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 CORO6Q6QEF8 472 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 KLHL36Q8N4N3 616 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 NANPQ8TBE9 248 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 SLC30A2Q9BRI3 323 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 PNRC2Q9NPJ4 139 aaKnown RBP17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 IL20Q9NYY1 176 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 UBAP1Q9NZ09 502 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 PCDHB10Q9UN67 800 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 CDH10Q9Y6N8 788 aa17.3■□□□□ 0.36
PDLIM4-205ENST00000463615 TMEM178BH3BS89 294 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 BHLHE40O14503 412 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 SBK2P0C263 348 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 ACSM4P0C7M7 580 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 SELEP16581 610 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 NOS3P29474 1203 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 MDH2P40926 338 aaKnown RBP17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 SLC6A9P48067 706 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 CENPAP49450 140 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 MMP16P51512 607 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 ZMYND11Q15326 602 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 OR2T2Q6IF00 324 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 ZNF770Q6IQ21 691 aaPredicted RBP17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 CFAP77Q6ZQR2 320 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 ARHGAP24Q8N264 748 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 OR4C15Q8NGM1 316 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 ZNF582Q96NG8 517 aaPredicted RBP17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 C7orf69Q9H7B7 122 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 PTTG3PQ9NZH4 202 aa17.29■□□□□ 0.36
PDLIM4-205ENST00000463615 LCN2P80188 198 aa17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 ZNF362Q5T0B9 420 aaPredicted RBP17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 MUC20Q8N307 709 aaPredicted RBP17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 SDR9C7Q8NEX9 313 aa17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 MEGF10Q96KG7 1140 aa17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 JMJD8Q96S16 334 aa17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 ATF6BQ99941 703 aa17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 BTBD10Q9BSF8 475 aa17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 MUC13Q9H3R2 512 aa17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 MRPL22Q9NWU5 206 aaKnown RBP17.28■□□□□ 0.36
PDLIM4-205ENST00000463615 ARHGAP32A7KAX9 2087 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 ADRA2CP18825 462 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 ATP6V1B2P21281 511 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 GATA4P43694 442 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 SRP9P49458 86 aaKnown RBP17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 COMPP49747 757 aaPredicted RBP17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 GYS2P54840 703 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 HNRNPA0Q13151 305 aaKnown RBP17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 RASSF6Q6ZTQ3 369 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 OR5AS1Q8N127 324 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 CELF2-AS1Q8N7Q2 184 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 ATG16L2Q8NAA4 619 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 DEFB108BQ8NET1 73 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 OR52E2Q8NGJ4 325 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 OR2AJ1Q8NGZ0 328 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 FAM216AQ8WUB2 273 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 POP5Q969H6 163 aaKnown RBP17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 PITX2Q99697 317 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 SUCNR1Q9BXA5 334 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 MAGIXQ9H6Y5 334 aa17.27■□□□□ 0.36
PDLIM4-205ENST00000463615 TCRBV5S2A0A599 114 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 TNFRSF11BO00300 401 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 MLNRO43193 412 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 ZNF12P17014 697 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 OTX1P32242 354 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 TRAP1Q12931 704 aaKnown RBP17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 GK2Q14410 553 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 LCN8Q6JVE9 175 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 LINC00346Q8IVM7 164 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 OR52L1Q8NGH7 329 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 OR2T4Q8NH00 348 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 DVL3Q92997 716 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 MAP6Q96JE9 813 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 CDADC1Q9BWV3 514 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 HCAR1Q9BXC0 346 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 EGLN3Q9H6Z9 239 aa17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 DDX28Q9NUL7 540 aaKnown RBP17.26■□□□□ 0.35
PDLIM4-205ENST00000463615 TRAPPC2LH3BP13 241 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 WNT2P09544 360 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 MXRA7P84157 204 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 DBPQ10586 325 aaPredicted RBP17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 PCK2Q16822 640 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 SLC35F1Q5T1Q4 408 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 LNX2Q8N448 690 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 FITM2Q8N6M3 262 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 OR10AD1Q8NGE0 317 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 OR9Q2Q8NGE9 314 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 ERGIC1Q969X5 290 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 RBM4Q9BWF3 364 aaKnown RBP17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 PLA2G12AQ9BZM1 189 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 FN3KQ9H479 309 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 TMEM165Q9HC07 324 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 MMP26Q9NRE1 261 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 TMEM100Q9NV29 134 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 LRCH1Q9Y2L9 728 aa17.25■□□□□ 0.35
PDLIM4-205ENST00000463615 INSIG2Q9Y5U4 225 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms