RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	GPR4	P46093	362 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	YAP1	P46937	504 aa	Known RBP	9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	GNB2	P62879	340 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	MAB21L1	Q13394	359 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	TRAM2	Q15035	370 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	CLEC12A	Q5QGZ9	265 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	WDR25	Q64LD2	544 aa	Predicted RBP	9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	SLC27A4	Q6P1M0	643 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	BTNL3	Q6UXE8	466 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	PTCHD4	Q6ZW05	846 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	MBOAT2	Q6ZWT7	520 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	TRPM8	Q7Z2W7	1104 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	MOGAT3	Q86VF5	341 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	RNF113B	Q8IZP6	322 aa	Known RBP	9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	KIR3DL3	Q8N743	410 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815		Q8TCH9	128 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	COG8	Q96MW5	612 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	SH3GL1	Q99961	368 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	ECSIT	Q9BQ95	431 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	NUDT16L1	Q9BRJ7	211 aa	Known RBP	9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	CHIA	Q9BZP6	476 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	SYT4	Q9H2B2	425 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	NMNAT1	Q9HAN9	279 aa	Predicted RBP	9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	NRIP3	Q9NQ35	241 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	CTSZ	Q9UBR2	303 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	COA3	Q9Y2R0	106 aa	Predicted RBP	9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	LHFPL6	Q9Y693	200 aa		9.28	□□□□□ -0.92
PTPN7-204	ENST00000462815	IGHV3-64D	A0A0J9YX35	117 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	DCTN6	O00399	190 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	MRAS	O14807	208 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	PHYH	O14832	338 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	IFNA14	P01570	189 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	MELTF	P08582	738 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	T-ENOL	P0DO92	83 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	SDHA	P31040	664 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	GUCA1A	P43080	201 aa	Predicted RBP	9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	PITPNB	P48739	271 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	RGS6	P49758	472 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	RAG2	P55895	527 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	FGF12	P61328	243 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	DBP	Q10586	325 aa	Predicted RBP	9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	KRR1	Q13601	381 aa	Known RBP	9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	KRT72	Q14CN4	511 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	ZBED5	Q49AG3	693 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	RUSC1-AS1	Q66K80	236 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	C1orf94	Q6P1W5	598 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	GLB1L2	Q8IW92	636 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	TMEM86B	Q8N661	226 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	ATG16L2	Q8NAA4	619 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	OR2T12	Q8NG77	320 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	OR13G1	Q8NGZ3	307 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	SLC7A13	Q8TCU3	470 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	TPD52L3	Q96J77	140 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	ZNF570	Q96NI8	536 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	TBX15	Q96SF7	602 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	COQ7	Q99807	217 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	MARCH7	Q9H992	704 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	MRGBP	Q9NV56	204 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	ARL8B	Q9NVJ2	186 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	CMTM6	Q9NX76	183 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	GRHPR	Q9UBQ7	328 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	SIGLEC7	Q9Y286	467 aa		9.27	□□□□□ -0.93
PTPN7-204	ENST00000462815	IGLV1-36	A0A0B4J1U3	117 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815		A0A1B0GUS0	222 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	BBIP1	A8MTZ0	92 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	SLC16A7	O60669	478 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	PTBP3	O95758	552 aa	Known RBP	9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	TXNDC12	O95881	172 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	KNG1	P01042	644 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	HLA-DPB1	P04440	258 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	IFNW1	P05000	195 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	SFTPB	P07988	381 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	CFHR2	P36980	270 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	CD200	P41217	278 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	CDKN2A	P42771	156 aa	Known RBP	9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	SRP9	P49458	86 aa	Known RBP	9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	PRSS12	P56730	875 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	BPIFB3	P59826	476 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	COX10	Q12887	443 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	MEP1B	Q16820	701 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	ZNF362	Q5T0B9	420 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	OLFML2A	Q68BL7	652 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	ASPHD2	Q6ICH7	369 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	FIP1L1	Q6UN15	594 aa	Known RBP	9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	DCDC5	Q6ZRR9	648 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	CBLL1	Q75N03	491 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	CELF2-AS1	Q8N7Q2	184 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	BHLHE23	Q8NDY6	225 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	C19orf18	Q8NEA5	215 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	OR8B3	Q8NGG8	313 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	APOBEC3D	Q96AK3	386 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	PLEKHA8	Q96JA3	519 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	ZNF582	Q96NG8	517 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	OR8B2	Q96RD0	313 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	FUZ	Q9BT04	418 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	FNDC11	Q9BVV2	318 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	NUAK2	Q9H093	628 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	WDR76	Q9H967	626 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	NOX4	Q9NPH5	578 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	PNRC2	Q9NPJ4	139 aa	Known RBP	9.26	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms