RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 C1orf198Q9H425 327 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 HINT3Q9NQE9 182 aaKnown RBP4.94□□□□□ -1.62
VPS36-202ENST00000462289 C8orf4Q9NR00 106 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 PAPOLBQ9NRJ5 636 aaKnown RBP4.94□□□□□ -1.62
VPS36-202ENST00000462289 HAO2Q9NYQ3 351 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 ENOPH1Q9UHY7 261 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 KLHL21Q9UJP4 597 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 NDRG4Q9ULP0 352 aaKnown RBP4.94□□□□□ -1.62
VPS36-202ENST00000462289 RNF115Q9Y4L5 304 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 ABCA1O95477 2261 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 IGLV3-9A0A075B6K5 115 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 LOC100509620A0A075B734 347 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 TMEM129A0AVI4 362 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 CCDC182A6NF36 153 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 E7EQL1 145 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 H3BSA7 217 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 H7C1C5 153 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 XKRYO14609 159 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 ABCD4O14678 606 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 EI24O14681 340 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SLC16A6O15403 523 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SLC16A7O60669 478 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 MITFO75030 526 aaPredicted RBP4.93□□□□□ -1.62
VPS36-202ENST00000462289 E2F6O75461 281 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 KHDRBS3O75525 346 aaKnown RBP4.93□□□□□ -1.62
VPS36-202ENST00000462289 SERPINI2O75830 405 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 KRT33AO76009 404 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SEC14L2O76054 403 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 HMGN1P05114 100 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 ZNF250P15622 560 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 ZNF32P17041 273 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SPI1P17947 270 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 NR4A1P22736 598 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 GLRXP35754 106 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 ALDH3A2P51648 485 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 ARHGDIAP52565 204 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 BLVRAP53004 296 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 UBE2NP61088 152 aaKnown RBP4.93□□□□□ -1.62
VPS36-202ENST00000462289 LCN6P62502 163 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 RAB1AP62820 205 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 ELF3P78545 371 aaPredicted RBP4.93□□□□□ -1.62
VPS36-202ENST00000462289 MYBPC1Q00872 1141 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 ROM1Q03395 351 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 GLO1Q04760 184 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SPOCK1Q08629 439 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 CD47Q08722 323 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 NPRL3Q12980 569 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 RIPK1Q13546 671 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 GINS1Q14691 196 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SLC36A2Q495M3 483 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 CCDC92Q53HC0 331 aaPredicted RBP4.93□□□□□ -1.62
VPS36-202ENST00000462289 SLC35D3Q5M8T2 416 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 CLEC12AQ5QGZ9 265 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 OGFRL1Q5TC84 451 aaPredicted RBP4.93□□□□□ -1.62
VPS36-202ENST00000462289 C9orf135Q5VTT2 229 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SLC18B1Q6NT16 456 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 DNM1P34Q6PK57 102 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 UGT2A3Q6UWM9 527 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SPNS3Q6ZMD2 512 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 Q6ZRM9 215 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 PRSS45Q7RTY3 260 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 C1orf174Q8IYL3 243 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 LRRC75A-AS1Q8N1F1 130 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 PAQR4Q8N4S7 273 aaPredicted RBP4.93□□□□□ -1.62
VPS36-202ENST00000462289 IQCF1Q8N6M8 205 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 PACRGLQ8N7B6 248 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SDR9C7Q8NEX9 313 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 KBTBD8Q8NFY9 601 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 OR4F15Q8NGB8 312 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 OR52E2Q8NGJ4 325 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 OR10S1Q8NGN2 331 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 OR2T4Q8NH00 348 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 TEX47Q8TBZ9 253 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 ST7LQ8TDW4 575 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 IPCEF1Q8WWN9 437 aaPredicted RBP4.93□□□□□ -1.62
VPS36-202ENST00000462289 C11orf40Q8WZ69 217 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 MBOAT4Q96T53 435 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 FOXC2Q99958 501 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 SH3GL3Q99963 347 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 TRAF4Q9BUZ4 470 aaPredicted RBP4.93□□□□□ -1.62
VPS36-202ENST00000462289 LIME1Q9H400 295 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 TBC1D23Q9NUY8 699 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 MOKQ9UQ07 419 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 TIMM10BQ9Y5J6 103 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 DMRT1Q9Y5R6 373 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 COMMD3-BMI1R4GMX3 469 aa4.93□□□□□ -1.62
VPS36-202ENST00000462289 A0A1W2PR80 420 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 C12orf71A8MTZ7 269 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ATP6V1G2-DDX39BF2Z307 99 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 H0YJX3 145 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 H7C417 338 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 J3QRE1 110 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 GNGT2O14610 69 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 CASKO14936 926 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 PRKYO43930 277 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 GLCEO94923 617 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 MPZL1O95297 269 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 FARS2O95363 451 aaKnown RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 RENP00797 406 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 SOD3P08294 240 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms