RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 HNRNPA0Q13151 305 aaKnown RBP8.61□□□□□ -1.03
SF3A3-204ENST00000462258 CRMP1Q14194 572 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 GK3PQ14409 553 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 MICAQ29983 383 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 KRTAP27-1Q3LI81 207 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 DNAL1Q4LDG9 190 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 OR2T2Q6IF00 324 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 LYPD4Q6UWN0 246 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 ZNF771Q7L3S4 317 aaPredicted RBP8.61□□□□□ -1.03
SF3A3-204ENST00000462258 TRPM8Q7Z2W7 1104 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 PEG10Q86TG7 708 aaKnown RBP8.61□□□□□ -1.03
SF3A3-204ENST00000462258 PHC2Q8IXK0 858 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 ADGRG5Q8IZF4 528 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 LNX2Q8N448 690 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 SLC37A3Q8NCC5 494 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 OR2T33Q8NG76 320 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 OR10AD1Q8NGE0 317 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 OR9Q1Q8NGQ5 310 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 OR2AJ1Q8NGZ0 328 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 OR4Q3Q8NH05 313 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 BCAS4Q8TDM0 211 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 TMEM158Q8WZ71 300 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 PTP4A1Q93096 173 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 HAVCR1Q96D42 359 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 OR2V2Q96R30 315 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 CDADC1Q9BWV3 514 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 TSSK6Q9BXA6 273 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 PNRC2Q9NPJ4 139 aaKnown RBP8.61□□□□□ -1.03
SF3A3-204ENST00000462258 BAIAP2Q9UQB8 552 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 COMMD3-BMI1R4GMX3 469 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 STAB1Q9NY15 2570 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 TVP23AA6NH52 213 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 AQP12BA6NM10 295 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 F5H5K5 113 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 M0R135 149 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 ACOT8O14734 319 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 SURF4O15260 269 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 PNPP00491 289 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 CST1P01037 141 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 IFNGP01579 166 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 GYPBP06028 91 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 ACSM4P0C7M7 580 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 PSKH1P11801 424 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 ZNF3P17036 446 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 RPS27P42677 84 aaKnown RBP8.6□□□□□ -1.03
SF3A3-204ENST00000462258 ACSM5Q6NUN0 579 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 SHQ1Q6PI26 577 aaKnown RBP8.6□□□□□ -1.03
SF3A3-204ENST00000462258 COLCA1Q6ZS62 124 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 AQP12AQ8IXF9 295 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 BHLHE23Q8NDY6 225 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 OR51L1Q8NGJ5 315 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 SPATA3Q8NHX4 192 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 TEX47Q8TBZ9 253 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 ITLN1Q8WWA0 313 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 ZNF799Q96GE5 643 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 MAP6Q96JE9 813 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 ZNF582Q96NG8 517 aaPredicted RBP8.6□□□□□ -1.03
SF3A3-204ENST00000462258 DDOQ99489 341 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 NIPSNAP1Q9BPW8 284 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 RBM4Q9BWF3 364 aaKnown RBP8.6□□□□□ -1.03
SF3A3-204ENST00000462258 CHID1Q9BWS9 393 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 C1QTNF5Q9BXJ0 243 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 WDR76Q9H967 626 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 TMEM106BQ9NUM4 274 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 DCAF16Q9NXF7 216 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 FAM53CQ9NYF3 392 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 UBAP1Q9NZ09 502 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 IL19Q9UHD0 177 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 BOLA1Q9Y3E2 137 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 NPTNQ9Y639 398 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 ANK2Q01484 3957 aa8.6□□□□□ -1.03
SF3A3-204ENST00000462258 ARRDC5A6NEK1 342 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 RIIAD1A6NNX1 92 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 IQCF6A8MYZ5 107 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 H3BN98 237 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 GYG2O15488 501 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 IGHV2-70P01814 119 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 LCATP04180 440 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SPARCP09486 303 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 ANPEPP15144 967 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SELEP16581 610 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SPI1P17947 270 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SLC6A9P48067 706 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 ENTPD1P49961 510 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 MMP16P51512 607 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SLC25A1P53007 311 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 TPTEP56180 551 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 PRSS12P56730 875 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
SF3A3-204ENST00000462258 MALLQ13021 153 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 FLOT2Q14254 428 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 GK2Q14410 553 aaPredicted RBP8.59□□□□□ -1.03
SF3A3-204ENST00000462258 RSPO1Q2MKA7 263 aaPredicted RBP8.59□□□□□ -1.03
SF3A3-204ENST00000462258 KRTAP24-1Q3LI83 254 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 ZNF362Q5T0B9 420 aaPredicted RBP8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SPATA24Q86W54 205 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SPICQ8N5J4 248 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 IQCF1Q8N6M8 205 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 ZNF283Q8N7M2 679 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 ATG16L2Q8NAA4 619 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms