RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SPTSSAQ969W0 71 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 EME1Q96AY2 570 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 SYT3Q9BQG1 590 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 HCAR1Q9BXC0 346 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 GABARAPL3Q9BY60 117 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 SHARPINQ9H0F6 387 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 WDR76Q9H967 626 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 MARCH7Q9H992 704 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 HINT3Q9NQE9 182 aaKnown RBP11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TMEM160Q9NX00 188 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 KCNS2Q9ULS6 477 aa11.35□□□□□ -0.59
RAB11FIP3-207ENST00000461009 A0A096LNT2 108 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 F5H5K5 113 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 M0R233 179 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 EI24O14681 340 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 NGFP01138 241 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 ALPLP05186 524 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 ADRA2AP08913 450 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 HNF1AP20823 631 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 SLC15A1P46059 708 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TPTEP56180 551 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 CDC42P60953 191 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 NKPD1Q17RQ9 610 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 FAM166AQ6J272 317 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 ZNF101Q8IZC7 436 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TCEANCQ8N8B7 351 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 SLC25A40Q8TBP6 338 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TMEM163Q8TC26 289 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 UBASH3BQ8TF42 649 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 SNX33Q8WV41 574 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 SLC7A6Q92536 515 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 APOBEC3DQ96AK3 386 aaPredicted RBP11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 ZMYND19Q96E35 227 aaPredicted RBP11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 MARS2Q96GW9 593 aaKnown RBP11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TEAD3Q99594 435 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 CENPMQ9NSP4 180 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TAAR3PQ9P1P4 343 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 FZR1Q9UM11 496 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 ABCA1O95477 2261 aa11.34□□□□□ -0.59
RAB11FIP3-207ENST00000461009 IGLV3-9A0A075B6K5 115 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 LOC100289279A0A1B0GTE1 492 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 VWC2LB2RUY7 222 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 PRKYO43930 277 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 LMX1BO60663 402 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 IGHV3-13P01766 116 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 APOC1P02654 83 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 FAM157CP0CG43 387 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 IGHV4-31P0DP07 118 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 EPHA2P29317 976 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 LIPAP38571 399 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 CHN2P52757 468 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ERVS71-1P61550 626 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 APOFQ13790 326 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 EIF2B1Q14232 305 aaKnown RBP11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MSMPQ1L6U9 139 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 NXNL2Q5VZ03 156 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MBNL2Q5VZF2 373 aaKnown RBP11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 LYPD4Q6UWN0 246 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RHOUQ7L0Q8 258 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MEPCEQ7L2J0 689 aaKnown RBP11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 DPY19L4Q7Z388 723 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 LRP11Q86VZ4 500 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 GID4Q8IVV7 300 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZNF454Q8N9F8 522 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 KLF14Q8TD94 323 aaPredicted RBP11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SLAMF6Q96DU3 332 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MAP6Q96JE9 813 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 COPS4Q9BT78 406 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 OR2J1Q9GZK6 312 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SP140LQ9H930 580 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 C8orf4Q9NR00 106 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 STARD10Q9Y365 291 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZANQ9Y493 2812 aa11.33□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ERICH4A6NGS2 130 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZNF878C9JN71 531 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ANKRD65E5RJM6 399 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 CLPTM1O96005 669 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 DBHP09172 617 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZNF16P17020 682 aaPredicted RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SLC2A5P22732 501 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 POLR2IP36954 125 aaKnown RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RPS27P42677 84 aaKnown RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 GRB2P62993 217 aaKnown RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 EFNB1P98172 346 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MALLQ13021 153 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RCN1Q15293 331 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZIK1Q3SY52 487 aaPredicted RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SPATA46Q5T0L3 261 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RFPL4BQ6ZWI9 263 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TIGD4Q8IY51 512 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZNF786Q8N393 782 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 BBS1Q8NFJ9 593 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 OR8J1Q8NGP2 316 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SPATA3Q8NHX4 192 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 THEM6Q8WUY1 208 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TRUB1Q8WWH5 349 aaKnown RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 HRASLS5Q96KN8 279 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 IL4I1Q96RQ9 567 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 BPESC1Q9GZL8 116 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms