RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 SURF4O15260 269 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 TPD52L2O43399 206 aaKnown RBP17.67■□□□□ 0.42
VARS-218ENST00000459667 SPRY3O43610 288 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 IGHV1-46P01743 117 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 ACSM4P0C7M7 580 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 PRR23D2P0DMB1 279 aaPredicted RBP17.67■□□□□ 0.42
VARS-218ENST00000459667 MRPS11P82912 194 aaKnown RBP17.67■□□□□ 0.42
VARS-218ENST00000459667 PPP2R2BQ00005 443 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 TSTQ16762 297 aaKnown RBP17.67■□□□□ 0.42
VARS-218ENST00000459667 RSPO1Q2MKA7 263 aaPredicted RBP17.67■□□□□ 0.42
VARS-218ENST00000459667 ZMAT1Q5H9K5 638 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 DCXRQ7Z4W1 244 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 OR10S1Q8NGN2 331 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 PTP4A1Q93096 173 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 YIPF5Q969M3 257 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 CMBLQ96DG6 245 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 DECR2Q9NUI1 292 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 PTTG3PQ9NZH4 202 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 PURGQ9UJV8 347 aaKnown RBP17.67■□□□□ 0.42
VARS-218ENST00000459667 OAZ3Q9UMX2 235 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 ZFHX3Q15911 3703 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 YLPM1P49750 1951 aaKnown RBP17.66■□□□□ 0.42
VARS-218ENST00000459667 INAFM1C9JVW0 142 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 ZNF593O00488 134 aaPredicted RBP17.66■□□□□ 0.42
VARS-218ENST00000459667 HOXB4P17483 251 aaPredicted RBP17.66■□□□□ 0.42
VARS-218ENST00000459667 KITLGP21583 273 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 IGFBP5P24593 272 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 PCK2Q16822 640 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 FAM209AQ5JX71 171 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 TMEM236Q5W0B7 351 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 PLBD1Q6P4A8 553 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 HAVCR1Q96D42 359 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 C1QTNF5Q9BXJ0 243 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 OR51V1Q9H2C8 321 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 SAP30LQ9HAJ7 183 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 MSL2Q9HCI7 577 aa17.66■□□□□ 0.42
VARS-218ENST00000459667 ZNF275Q9NSD4 429 aaPredicted RBP17.66■□□□□ 0.42
VARS-218ENST00000459667 DDX28Q9NUL7 540 aaKnown RBP17.66■□□□□ 0.42
VARS-218ENST00000459667 NF1P21359 2839 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 FN1P02751 2386 aaKnown RBP17.65■□□□□ 0.42
VARS-218ENST00000459667 SAC3D1A6NKF1 404 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 H3BNX3 289 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 TLX2O43763 284 aaPredicted RBP17.65■□□□□ 0.42
VARS-218ENST00000459667 CDC14BO60729 498 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 GLCEO94923 617 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 ADH4P08319 380 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 IGHV4-31P0DP07 118 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 RAC2P15153 192 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 TPTEP56180 551 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 HLXQ14774 488 aaPredicted RBP17.65■□□□□ 0.42
VARS-218ENST00000459667 ZSCAN26Q16670 478 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 TEX30Q5JUR7 227 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 KDM4DQ6B0I6 523 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 FBXW12Q6X9E4 464 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 COLCA1Q6ZS62 124 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 ERI1Q8IV48 349 aaKnown RBP17.65■□□□□ 0.42
VARS-218ENST00000459667 OR6N2Q8NGY6 317 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 STMN2Q93045 179 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 SPTSSAQ969W0 71 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 INTS14Q96SY0 518 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 PKP2Q99959 881 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 RBM4BQ9BQ04 359 aaKnown RBP17.65■□□□□ 0.42
VARS-218ENST00000459667 YAE1D1Q9NRH1 226 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 ZDHHC8Q9ULC8 765 aa17.65■□□□□ 0.42
VARS-218ENST00000459667 IGHV1-69-2A0A0G2JMI3 117 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 M0R135 149 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 LILRA1O75019 489 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 RP2O75695 350 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 TACSTD2P09758 323 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 GSTT1P30711 240 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 CRYBB2P43320 205 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 GPR6P46095 362 aaPredicted RBP17.64■□□□□ 0.41
VARS-218ENST00000459667 CHN2P52757 468 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 TRIP10Q15642 601 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 USP51Q70EK9 711 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 SLAMF6Q96DU3 332 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 ZNF799Q96GE5 643 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 DIRC2Q96SL1 478 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 COPS4Q9BT78 406 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 MARCH7Q9H992 704 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 S100A14Q9HCY8 104 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 ORC6Q9Y5N6 252 aa17.64■□□□□ 0.41
VARS-218ENST00000459667 LRP5LA4QPB2 252 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 ZNF878C9JN71 531 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 PRODHO43272 600 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 MITFO75030 526 aaPredicted RBP17.63■□□□□ 0.41
VARS-218ENST00000459667 LCATP04180 440 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 ZNF16P17020 682 aaPredicted RBP17.63■□□□□ 0.41
VARS-218ENST00000459667 SLC6A9P48067 706 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 GZMKP49863 264 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 TMEM33P57088 247 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 EIF2B1Q14232 305 aaKnown RBP17.63■□□□□ 0.41
VARS-218ENST00000459667 PTGES3Q15185 160 aaKnown RBP17.63■□□□□ 0.41
VARS-218ENST00000459667 TAF13Q15543 124 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 SNAPC1Q16533 368 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 KLHL12Q53G59 568 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 C6orf52Q5T4I8 152 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 CYB5R2Q6BCY4 276 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 DPY19L4Q7Z388 723 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 NAA40Q86UY6 237 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms