RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 GIFP27352 417 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 IL2RGP31785 369 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 GZMKP49863 264 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 MMP15P51511 669 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 CHN2P52757 468 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 SLC25A1P53007 311 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 TPTEP56180 551 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 HNRNPA0Q13151 305 aaKnown RBP15.91■□□□□ 0.14
USP39-209ENST00000458268 ZMAT1Q5H9K5 638 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 C6orf52Q5T4I8 152 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 OR2T2Q6IF00 324 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 NAA40Q86UY6 237 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 OR2Z1Q8NG97 314 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 LRTOMTQ8WZ04 291 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 ZMYND19Q96E35 227 aaPredicted RBP15.91■□□□□ 0.14
USP39-209ENST00000458268 COG8Q96MW5 612 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 DCLRE1CQ96SD1 692 aaKnown RBP15.91■□□□□ 0.14
USP39-209ENST00000458268 SEMA6AQ9H2E6 1030 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 CYSLTR2Q9NS75 346 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 ATPIF1Q9UII2 106 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 SONP18583 2426 aaKnown RBP15.9■□□□□ 0.14
USP39-209ENST00000458268 H3BSA7 217 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 M0R135 149 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 TLX2O43763 284 aaPredicted RBP15.9■□□□□ 0.14
USP39-209ENST00000458268 ICMTO60725 284 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 ACSM4P0C7M7 580 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 PRKXP51817 358 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 TNFAIP6P98066 277 aaPredicted RBP15.9■□□□□ 0.14
USP39-209ENST00000458268 ECH1Q13011 328 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 RIN1Q13671 783 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 EIF2B1Q14232 305 aaKnown RBP15.9■□□□□ 0.14
USP39-209ENST00000458268 ATP6AP1Q15904 470 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 OR10S1Q8NGN2 331 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 CCL17Q92583 94 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 PTP4A1Q93096 173 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 SPTSSAQ969W0 71 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 SLAMF6Q96DU3 332 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 ELMOD3Q96FG2 381 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 ZNF799Q96GE5 643 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 INTS14Q96SY0 518 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 TEX12Q9BXU0 123 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 NMNAT2Q9BZQ4 307 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 EGLN1Q9GZT9 426 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 KRT84Q9NSB2 600 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 NF1P21359 2839 aa15.9■□□□□ 0.14
USP39-209ENST00000458268 ISPDA4D126 451 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 G3V2T6 193 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 LILRA1O75019 489 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 MITFO75030 526 aaPredicted RBP15.89■□□□□ 0.13
USP39-209ENST00000458268 HMGN1P05114 100 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 TNFSF4P23510 183 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 GSTT1P30711 240 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 RBMXP38159 391 aaKnown RBP15.89■□□□□ 0.13
USP39-209ENST00000458268 DAPP51397 102 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 MALLQ13021 153 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 HFEQ30201 348 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 SPRNQ5BIV9 151 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 CPOQ8IVL8 374 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 ZNF283Q8N7M2 679 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 UTP4Q969X6 686 aaKnown RBP15.89■□□□□ 0.13
USP39-209ENST00000458268 MSI2Q96DH6 328 aaKnown RBP15.89■□□□□ 0.13
USP39-209ENST00000458268 SOX7Q9BT81 388 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 LPAR2Q9HBW0 351 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 PNRC2Q9NPJ4 139 aaKnown RBP15.89■□□□□ 0.13
USP39-209ENST00000458268 TVP23BQ9NYZ1 205 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 MALRD1Q5VYJ5 2156 aa15.89■□□□□ 0.13
USP39-209ENST00000458268 ZFHX3Q15911 3703 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 IGHV3-64DA0A0J9YX35 117 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 SAC3D1A6NKF1 404 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 CLDN25C9JDP6 229 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 M0R129 80 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 WNT9BO14905 357 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 SURF4O15260 269 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 TGFAP01135 160 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 SLC2A1P11166 492 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 LIPAP38571 399 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 NAA10P41227 235 aaPredicted RBP15.88■□□□□ 0.13
USP39-209ENST00000458268 CRISP1P54107 249 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 SNAPC1Q16533 368 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 FAM209AQ5JX71 171 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 FAM166AQ6J272 317 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 CXXC5Q7LFL8 322 aaKnown RBP15.88■□□□□ 0.13
USP39-209ENST00000458268 MRPL21Q7Z2W9 205 aaKnown RBP15.88■□□□□ 0.13
USP39-209ENST00000458268 DPY19L4Q7Z388 723 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 HIPK1Q86Z02 1210 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 BBS1Q8NFJ9 593 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 OR10AD1Q8NGE0 317 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 CLDND2Q8NHS1 167 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 PYDC1Q8WXC3 89 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 HAVCR1Q96D42 359 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 NKIRAS2Q9NYR9 191 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 DNAJC27Q9NZQ0 273 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 CGGBP1Q9UFW8 167 aaPredicted RBP15.88■□□□□ 0.13
USP39-209ENST00000458268 KCNS2Q9ULS6 477 aa15.88■□□□□ 0.13
USP39-209ENST00000458268 DYSFO75923 2080 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 EBAG9O00559 213 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 TBX1O43435 398 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 SELENOFO60613 162 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 RP2O75695 350 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 GLCEO94923 617 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms