RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TMEM246Q9BRR3 403 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 NUAK2Q9H093 628 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 FGFR1OP2Q9NVK5 253 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 FAM32AQ9Y421 112 aaKnown RBP18.01■□□□□ 0.47
CPNE1-220ENST00000458038 CYB5R3P00387 301 aaPredicted RBP18■□□□□ 0.47
CPNE1-220ENST00000458038 H1F0P07305 194 aaKnown RBP18■□□□□ 0.47
CPNE1-220ENST00000458038 GATA4P43694 442 aa18■□□□□ 0.47
CPNE1-220ENST00000458038 PRDM13Q9H4Q3 707 aa18■□□□□ 0.47
CPNE1-220ENST00000458038 RPS6KA6Q9UK32 745 aa18■□□□□ 0.47
CPNE1-220ENST00000458038 IER3IP1Q9Y5U9 82 aa18■□□□□ 0.47
CPNE1-220ENST00000458038 SOCS2O14508 198 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 PHYHO14832 338 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 SERPINA1P01009 418 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 IRF2P14316 349 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 RBMXP38159 391 aaKnown RBP17.99■□□□□ 0.47
CPNE1-220ENST00000458038 PITPNBP48739 271 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 COX10Q12887 443 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 ECH1Q13011 328 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 ZNF362Q5T0B9 420 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-220ENST00000458038 DCDC5Q6ZRR9 648 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 COLCA1Q6ZS62 124 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 MOGAT3Q86VF5 341 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 POU5F2Q8N7G0 328 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 TMIGD2Q96BF3 282 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 CLN8Q9UBY8 286 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 AURKCQ9UQB9 309 aa17.99■□□□□ 0.47
CPNE1-220ENST00000458038 NOP16Q9Y3C1 178 aaKnown RBP17.99■□□□□ 0.47
CPNE1-220ENST00000458038 MLNRO43193 412 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 RHCEP18577 417 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 FPR3P25089 353 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 OMPP47874 163 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 OCLNQ16625 522 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 PTCHD4Q6ZW05 846 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 OR11L1Q8NGX0 322 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 Q8TCH9 128 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 RSRC1Q96IZ7 334 aaKnown RBP17.98■□□□□ 0.47
CPNE1-220ENST00000458038 NUDT16L1Q9BRJ7 211 aaKnown RBP17.98■□□□□ 0.47
CPNE1-220ENST00000458038 EFCAB1Q9HAE3 211 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 NOX4Q9NPH5 578 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 LHFPL6Q9Y693 200 aa17.98■□□□□ 0.47
CPNE1-220ENST00000458038 TRAV40A0A0B4J280 105 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 F5H5P2 479 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 H0YL77 283 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 NME4O00746 187 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 IMPA2O14732 288 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 ZNF205O95201 554 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 GPANK1O95872 356 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 CDKN2AP42771 156 aaKnown RBP17.97■□□□□ 0.47
CPNE1-220ENST00000458038 CENPAP49450 140 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 NPY4RP50391 375 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 KCNJ8Q15842 424 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 SLC36A3Q495N2 470 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 FGD3Q5JSP0 725 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 BHLHE23Q8NDY6 225 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 FAM162AQ96A26 154 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 SLC22A4Q9H015 551 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 KIF17Q9P2E2 1029 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 VWFP04275 2813 aa17.97■□□□□ 0.47
CPNE1-220ENST00000458038 WNK1Q9H4A3 2382 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 IGHV3OR16-10A0A075B7F0 116 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 UNC119BA6NIH7 251 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 ENSAO43768 121 aaKnown RBP17.96■□□□□ 0.47
CPNE1-220ENST00000458038 LIPFP07098 398 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 GSK3BP49841 420 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 SLC7A2P52569 658 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 MALLQ13021 153 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 RSPO1Q2MKA7 263 aaPredicted RBP17.96■□□□□ 0.47
CPNE1-220ENST00000458038 KRTAP27-1Q3LI81 207 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 GPR157Q5UAW9 335 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 OTPQ5XKR4 325 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 CD276Q5ZPR3 534 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 WDR25Q64LD2 544 aaPredicted RBP17.96■□□□□ 0.47
CPNE1-220ENST00000458038 CGB2Q6NT52 195 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 SMARCD3Q6STE5 483 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 SPATC1Q76KD6 591 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 TSEN54Q7Z6J9 526 aaKnown RBP17.96■□□□□ 0.47
CPNE1-220ENST00000458038 FITM2Q8N6M3 262 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 OR10S1Q8NGN2 331 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 ZDHHC16Q969W1 377 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 NDUFAF4Q9P032 175 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 ARMCX1Q9P291 453 aa17.96■□□□□ 0.47
CPNE1-220ENST00000458038 GMPR2Q9P2T1 348 aaKnown RBP17.96■□□□□ 0.47
CPNE1-220ENST00000458038 IGLV1-36A0A0B4J1U3 117 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 SRRM5B3KS81 715 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 CRYBA1P05813 215 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 COX4I1P13073 169 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 MDH1P40925 334 aaKnown RBP17.95■□□□□ 0.46
CPNE1-220ENST00000458038 PMELP40967 661 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 CD200P41217 278 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 SMIM11AP58511 58 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 PDLIM3Q53GG5 364 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-220ENST00000458038 C8orf82Q6P1X6 216 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-220ENST00000458038 HACD2Q6Y1H2 254 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 TMEM86BQ8N661 226 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 FAM71F1Q96KD3 344 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-220ENST00000458038 ERMAPQ96PL5 475 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-220ENST00000458038 PITX2Q99697 317 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 KCTD14Q9BQ13 255 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-220ENST00000458038 BEX1Q9HBH7 125 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 B9D1Q9UPM9 204 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms