RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CYC1P08574 325 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 NAT1P18440 290 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 NUP62P37198 522 aaPredicted RBP16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 FOXK1P85037 733 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 STEAP1BQ6NZ63 245 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 GABRG1Q8N1C3 465 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 JAGN1Q8N5M9 183 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 NKAIN3Q8N8D7 197 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 TMEM229BQ8NBD8 167 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 SPACA9Q96E40 222 aaPredicted RBP16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 RASL10BQ96S79 203 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 FBXL2Q9UKC9 423 aa16.35■□□□□ 0.21
SEMA3B-209ENST00000456560 LPLP06858 475 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 ACTBP60709 375 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 ACTG1P63261 375 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 PMS2CLQ68D20 193 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 ZNF627Q7L945 461 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 UEVLDQ8IX04 471 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 IQCF2Q8IXL9 164 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 ZBTB44Q8NCP5 570 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 ELP5Q8TE02 316 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 EDAQ92838 391 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 DVL3Q92997 716 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 FOXRED1Q96CU9 486 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 WDR89Q96FK6 387 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 CXorf58Q96LI9 332 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 DEFB126Q9BYW3 111 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 PI4KAP42356 2102 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 TNRC6BQ9UPQ9 1833 aaKnown RBP16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 MCRIP1C9JLW8 97 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 TSPAN9O75954 239 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 OPN1LWP04000 364 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 MELTFP08582 738 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 FGF5P12034 268 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 POU3F2P20265 443 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 BTN1A1Q13410 526 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 C3orf33Q6P1S2 294 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 FADS6Q8N9I5 356 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 WDSUB1Q8N9V3 476 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 OR4D6Q8NGJ1 314 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 OR5M1Q8NGP8 315 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 FGGYQ96C11 551 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 C1orf198Q9H425 327 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 RALGAPA1Q6GYQ0 2036 aa16.34■□□□□ 0.21
SEMA3B-209ENST00000456560 CCDC163A0A0D9SF12 145 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 TRAF3IP2O43734 574 aaPredicted RBP16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 RLN1P04808 185 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 PGA4P0DJD7 388 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 PGA3P0DJD8 388 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 RAB6AP20340 208 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 HOXA6P31267 233 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 TAS2R19P59542 299 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 PMPCAQ10713 525 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 ZNF239Q16600 458 aaKnown RBP16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 SFRP5Q5T4F7 317 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 RGS7BPQ6MZT1 257 aaPredicted RBP16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 ZNF813Q6ZN06 617 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 NOXO1Q8NFA2 376 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 OR8S1Q8NH09 359 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 COQ8AQ8NI60 647 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 NAT6Q93015 286 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 TMPRSS13Q9BYE2 586 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 PBOV1Q9GZY1 135 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 ZNF814B7Z6K7 855 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 SNAPC5O75971 98 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 ITGB2P05107 769 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 PCOLCEQ15113 449 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 TUSC1Q2TAM9 212 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 MOGAT2Q3SYC2 334 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 OR10K2Q6IF99 312 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 SLC25A47Q6Q0C1 308 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 KLHL24Q6TFL4 600 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 ALX4Q9H161 411 aaPredicted RBP16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 SLCO5A1Q9H2Y9 848 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 TMEM185BQ9H7F4 350 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 LHFPL6Q9Y693 200 aa16.33■□□□□ 0.2
SEMA3B-209ENST00000456560 LOC102723996A0A087X1L8 192 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 A0A1W2PNR3 127 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 UBE2QL1A1L167 161 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 FCER2P06734 321 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 HSD11B1P28845 292 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 BDKRB2P30411 391 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 EIF1AXP47813 144 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 CAPZA1P52907 286 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 CLRN1P58418 232 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 C2orf68Q2NKX9 166 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 FAM122CQ6P4D5 195 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 CDH26Q8IXH8 852 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 OR5B2Q96R09 309 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 GAL3ST1Q99999 423 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 WDR54Q9H977 334 aa16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 MYEF2Q9P2K5 600 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 GDF2Q9UK05 429 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 CHCHD2Q9Y6H1 151 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-209ENST00000456560 OR6C65A6NJZ3 312 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 POM121CA8CG34 1229 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 IGHG1P01857 330 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 NMBP08949 121 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 MFAP5Q13361 173 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 HLXQ14774 488 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms