RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 PRSS37A4D1T9 235 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 SCDO00767 359 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 AGPAT2O15120 278 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 ZNF264O43296 627 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 FCGR3AP08637 254 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 NME2P22392 152 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 SKP2Q13309 424 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 CD226Q15762 336 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 TERB2Q8NHR7 220 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 SLC22A8Q8TCC7 542 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 OR1E3Q8WZA6 343 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 ZNF285Q96NJ3 590 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 OR5B2Q96R09 309 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 SLC5A7Q9GZV3 580 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 OR10A5Q9H207 317 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 PDE7BQ9NP56 450 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 CACFD1Q9UGQ2 172 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 PCOLCE2Q9UKZ9 415 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 EMC9Q9Y3B6 208 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 LOC107986453A0A1B0GWG9 222 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 WIPF3A6NGB9 483 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 OIP5O43482 229 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 SFT2D2O95562 160 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.44
PTPRE-204ENST00000455661 SERPINA5P05154 406 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 GDI1P31150 447 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 SULT1A2P50226 295 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 BTG2P78543 158 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 CBLN3Q6UW01 205 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 DHRS11Q6UWP2 260 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 BTNL8Q6UX41 500 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 FRMD1Q8N878 549 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 CCL4L1Q8NHW4 92 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 SCGB3A2Q96PL1 93 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 METTL8Q9H825 291 aaKnown RBP12.27□□□□□ -0.44
PTPRE-204ENST00000455661 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 FN3KRPQ9HA64 309 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 PARP11Q9NR21 331 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 DZANK1Q9NVP4 752 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 MRPL22Q9NWU5 206 aaKnown RBP12.27□□□□□ -0.44
PTPRE-204ENST00000455661 GHRLQ9UBU3 117 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 TIMM10BQ9Y5J6 103 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 FLVCR1Q9Y5Y0 555 aa12.27□□□□□ -0.44
PTPRE-204ENST00000455661 CACNA1CQ13936 2221 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 COL4A2P08572 1712 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 LTBP2Q14767 1821 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 TIMP1P01033 207 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 ISG15P05161 165 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 LINC00271P0C7V0 271 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 GNB3P16520 340 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 HAAOP46952 286 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 GSK3AP49840 483 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 RPL27P61353 136 aaKnown RBP12.27□□□□□ -0.45
PTPRE-204ENST00000455661 SLC9A3R2Q15599 337 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 FAM78AQ5JUQ0 283 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 MED25Q71SY5 747 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 OR52N5Q8NH56 324 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 ROBO4Q8WZ75 1007 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 TOX2Q96NM4 488 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 NAA11Q9BSU3 229 aaPredicted RBP12.27□□□□□ -0.45
PTPRE-204ENST00000455661 OR52A1Q9UKL2 312 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 TBX21Q9UL17 535 aa12.27□□□□□ -0.45
PTPRE-204ENST00000455661 A0A0J9YY10 115 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 WRBO00258 174 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 TXNL1O43396 289 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 ADAP1O75689 374 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 HTR3BO95264 441 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 BPNT1O95861 308 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 PLGP00747 810 aaPredicted RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 RNH1P13489 461 aaKnown RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 CXCR1P25024 350 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 PMELP40967 661 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 AKR1C3P42330 323 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 GLP1RP43220 463 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 GPR3P46089 330 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 CSNK1EP49674 416 aaKnown RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 SQSTM1Q13501 440 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 C2orf27AQ580R0 203 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 KRBOX4Q5JUW0 171 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 FNDC7Q5VTL7 733 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 ZNF776Q68DI1 518 aaPredicted RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 C2orf50Q96LR7 162 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 TWSG1Q9GZX9 223 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 TUBA4BQ9H853 241 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 PRTFDC1Q9NRG1 225 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 MEMO1Q9Y316 297 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 FANCMQ8IYD8 2048 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 CLDN4O14493 209 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 PLRG1O43660 514 aaKnown RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 EIF2S3P41091 472 aaKnown RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 SRSF5Q13243 272 aaKnown RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 EBPQ15125 230 aaKnown RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 ACKR1Q16570 336 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 ACTBL2Q562R1 376 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 RPL7L1Q6DKI1 246 aaKnown RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 CLEC18BQ6UXF7 455 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 ETV3LQ6ZN32 361 aa12.26□□□□□ -0.45
PTPRE-204ENST00000455661 MAMDC2Q7Z304 686 aaPredicted RBP12.26□□□□□ -0.45
PTPRE-204ENST00000455661 MARCH3Q86UD3 253 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms