RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 HSD11B1P28845 292 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 EFNB3Q15768 340 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 KCTD20Q7Z5Y7 419 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 KRT77Q7Z794 578 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 TMEM171Q8WVE6 324 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 ZNF799Q96GE5 643 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 AMELYQ99218 206 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 AMBNQ9NP70 447 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 FGF20Q9NP95 211 aaPredicted RBP12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 COPS3Q9UNS2 423 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 KLHDC2Q9Y2U9 406 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 CMAHPQ9Y471 501 aa12.34□□□□□ -0.43
HMGXB4-204ENST00000455359 A0A1W2PQL4 384 aaPredicted RBP12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 KRT8P05787 483 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 DBHP09172 617 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 CCDC159P0C7I6 412 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 PRF1P14222 555 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 TTKP33981 857 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 THBS4P35443 961 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 SERPINF1P36955 418 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 HCCSP53701 268 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 SELENOVP59797 346 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 PSMA6P60900 246 aaKnown RBP12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 MED21Q13503 144 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 SMN1Q16637 294 aaKnown RBP12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 MOGQ16653 247 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF829Q3KNS6 432 aaPredicted RBP12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 C6orf141Q5SZD1 244 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 AGAP6Q5VW22 663 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 LAIR2Q6ISS4 152 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 PLEKHG7Q6ZR37 379 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF101Q8IZC7 436 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 FBXL14Q8N1E6 418 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 OR52H1Q8NGJ2 320 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 ABHD4Q8TB40 342 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 HAVCR2Q8TDQ0 301 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 SMAP2Q8WU79 429 aaPredicted RBP12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 SLC7A6Q92536 515 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 ITFG2Q969R8 447 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 DOK1Q99704 481 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 SCN3BQ9NY72 215 aa12.33□□□□□ -0.44
HMGXB4-204ENST00000455359 DCHS2Q6V1P9 2916 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 CRYBG3Q68DQ2 2970 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 DAPL1A0PJW8 107 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 B9A039 149 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 LCKP06239 509 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 TACSTD2P09758 323 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 OR4A8P0C604 315 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 DANCRP0C864 163 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 FAM157BP0CG42 384 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 BMP4P12644 408 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF250P15622 560 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 FABP6P51161 128 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 MMP16P51512 607 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 RIDAP52758 137 aaKnown RBP12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 ACTA2P62736 377 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 ACTG2P63267 376 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 MALLQ13021 153 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 ADIPOQQ15848 244 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF718Q3SXZ3 478 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF684Q5T5D7 378 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 MBNL2Q5VZF2 373 aaKnown RBP12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 RGS7BPQ6MZT1 257 aaPredicted RBP12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 LRRN1Q6UXK5 716 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 RFPL4BQ6ZWI9 263 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 SPATC1Q76KD6 591 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 DTX2Q86UW9 622 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 MUC15Q8N387 334 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF283Q8N7M2 679 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 OR52I1Q8NGK6 324 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 OR1J1Q8NGS3 322 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 SNX33Q8WV41 574 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 MRPL24Q96A35 216 aaKnown RBP12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 TMEM80Q96HE8 168 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 OPA3Q9H6K4 179 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 UBTD1Q9HAC8 227 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 SLCO1C1Q9NYB5 712 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 PSORS1C1Q9UIG5 152 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 GPR160Q9UJ42 338 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 IKZF2Q9UKS7 526 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 DIMT1Q9UNQ2 313 aaKnown RBP12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 EXOSC1Q9Y3B2 195 aaKnown RBP12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 LRP12Q9Y561 859 aa12.32□□□□□ -0.44
HMGXB4-204ENST00000455359 ITPR2Q14571 2701 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 APCP25054 2843 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 METTL15A6NJ78 407 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 APOL3O95236 402 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 LCATP04180 440 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 GCH1P30793 250 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 SLC6A9P48067 706 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 CX3CR1P49238 355 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 PRKXP51817 358 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 PPP1CBP62140 327 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF85Q03923 595 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 MRPL28Q13084 256 aaKnown RBP12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 GALEQ14376 348 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 CDONQ4KMG0 1287 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 FBXW12Q6X9E4 464 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 FAM220AQ7Z4H9 259 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms