RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ACSM4P0C7M7 580 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 ATP6V1B1P15313 513 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 APLNRP35414 380 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 GDI2P50395 445 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 MMP16P51512 607 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 BDH1Q02338 343 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 HGFACQ04756 655 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 TBC1D28Q2M2D7 210 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 FDX2Q6P4F2 183 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 KCTD8Q6ZWB6 473 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 ZNF367Q7RTV3 350 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 PRSS45Q7RTY3 260 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 RORBQ92753 470 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 ZNF799Q96GE5 643 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 DACH2Q96NX9 599 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 DOK1Q99704 481 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 FAM206AQ9NX38 181 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 R4GMQ9 66 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 CADP27708 2225 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 C5orf49A4QMS7 147 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 TUBAL3A6NHL2 446 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 E9PI62 339 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 F5H5K5 113 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 C19orf84I3L1E1 186 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 ICMTO60725 284 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 PNPP00491 289 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 APOC1P02654 83 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 EPXP11678 715 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 TGM4P49221 684 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 CX3CR1P49238 355 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 ZNF83P51522 516 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 PRKXP51817 358 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 GBX2P52951 348 aaPredicted RBP14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 TPTEP56180 551 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 GALK2Q01415 458 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 SNTB1Q13884 538 aaKnown RBP14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 MED22Q15528 200 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 ZNF829Q3KNS6 432 aaPredicted RBP14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 CCDC58Q4VC31 144 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 DRAM2Q6UX65 266 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 KLBQ86Z14 1044 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 WFDC8Q8IUA0 241 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 ACBD4Q8NC06 268 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 OR1J2Q8NGS2 313 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 LINC01560Q8TB33 94 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 ZC3HAV1LQ96H79 300 aaKnown RBP14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 ISYNA1Q9NPH2 558 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 TRIM36Q9NQ86 728 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 COL12A1Q99715 3063 aa14.38□□□□□ -0.11
CCDC90B-202ENST00000455220 RPP14O95059 124 aaKnown RBP14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 CCL2P13500 99 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 ZNF35P13682 527 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 JUNBP17275 347 aaPredicted RBP14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 MFGE8Q08431 387 aaPredicted RBP14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 COLCA1Q6ZS62 124 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 PAQR4Q8N4S7 273 aaPredicted RBP14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 ZNF283Q8N7M2 679 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 IL17RDQ8NFM7 739 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 RPS4Y2Q8TD47 263 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 COG8Q96MW5 612 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 MOB1AQ9H8S9 216 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 VCX3AQ9NNX9 186 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 NGBQ9NPG2 151 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 G6PC2Q9NQR9 355 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 GRIP1Q9Y3R0 1128 aa14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 SPTAN1Q13813 2472 aaKnown RBP14.37□□□□□ -0.11
CCDC90B-202ENST00000455220 TMEM269A0A1B0GVZ9 245 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 ACOD1A6NK06 481 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 M0R1B8 84 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 PSMB10P40306 273 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 GTF2A1P52655 376 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 ZNF121P58317 390 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 TAS2R43P59537 309 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 NAAAQ02083 359 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 MLLT11Q13015 90 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 NEDD8Q15843 81 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 ALKBH2Q6NS38 261 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 OR2G2Q8NGZ5 317 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 MUL1Q969V5 352 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 MGLLQ99685 303 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 C1QTNF5Q9BXJ0 243 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 ST6GALNAC2Q9UJ37 374 aa14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 HEATR1Q9H583 2144 aaKnown RBP14.36□□□□□ -0.11
CCDC90B-202ENST00000455220 IGHV2OR16-5A0A0B4J2B6 119 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 LOC110117498-PIK3R3F6TDL0 507 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 OGG1O15527 345 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 INMTO95050 263 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 CLPTM1O96005 669 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 PTAFRP25105 342 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 CD40P25942 277 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 WNT5AP41221 380 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 RGS6P49758 472 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 CCR9P51686 369 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 NANOS3P60323 173 aaKnown RBP14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 CDK5R1Q15078 307 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 SYT6Q5T7P8 510 aaPredicted RBP14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 RPL22L1Q6P5R6 122 aaKnown RBP14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 TMEM108Q6UXF1 575 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 NAA40Q86UY6 237 aa14.35□□□□□ -0.11
CCDC90B-202ENST00000455220 CATSPERDQ86XM0 798 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms