RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MEIOBQ8N635 442 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.1□□□□□ -0.15
SNX17-204ENST00000453453 POMGNT2Q8NAT1 580 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 OR6M1Q8NGM8 313 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 OR2V1Q8NHB1 315 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 RAB40AQ8WXH6 277 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 NSMAFQ92636 917 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 ZFP3Q96NJ6 502 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 DEFB127Q9H1M4 99 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 BRD7Q9NPI1 651 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 NRIP3Q9NQ35 241 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 CYB5R1Q9UHQ9 305 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 IER3IP1Q9Y5U9 82 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 KIAA1549Q9HCM3 1950 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 PTPRQQ9UMZ3 2332 aa14.1□□□□□ -0.15
SNX17-204ENST00000453453 TRGV5A0A0B4J1U4 118 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 A0A0J9YW62 118 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 MCRIP1C9JLW8 97 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 TNFSF11O14788 317 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 ARPC3O15145 178 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 RP2O75695 350 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 F13BP05160 661 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 NMBP08949 121 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 SNRPBP14678 240 aaKnown RBP14.09□□□□□ -0.15
SNX17-204ENST00000453453 NFYAP23511 347 aaPredicted RBP14.09□□□□□ -0.15
SNX17-204ENST00000453453 ERVK-25P63136 954 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 ZP4Q12836 540 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 GGTLC2Q14390 218 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 CDK5R1Q15078 307 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 RPUSD3Q6P087 351 aaKnown RBP14.09□□□□□ -0.15
SNX17-204ENST00000453453 RPL22L1Q6P5R6 122 aaKnown RBP14.09□□□□□ -0.15
SNX17-204ENST00000453453 CHMP1BQ7LBR1 199 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 RBMXL3Q8N7X1 1067 aaKnown RBP14.09□□□□□ -0.15
SNX17-204ENST00000453453 GHSRQ92847 366 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 ELMOD3Q96FG2 381 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 MS4A3Q96HJ5 214 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 GRHPRQ9UBQ7 328 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 TUBD1Q9UJT1 453 aa14.09□□□□□ -0.15
SNX17-204ENST00000453453 ANKRD20A5PA0PJZ0 165 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 FAM183AA6NL82 134 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 E9PI62 339 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 J3QLW9 94 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 TSPAN4O14817 238 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 CALCBP10092 127 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 ZNF19P17023 458 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 S100A11P31949 105 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 STARP49675 285 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 SCAND1P57086 179 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 CARD18P57730 90 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 CTAG1AP78358 180 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 MPPED2Q15777 294 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 EMC4Q5J8M3 183 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 RNFT1Q5M7Z0 435 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 FAM27D1Q5T7N8 215 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 GGNQ86UU5 652 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 JAZF1Q86VZ6 243 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 LRRC75AQ8NAA5 344 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 OR5T2Q8NGG2 359 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 LINC00052Q96N35 136 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 ADAM18Q9Y3Q7 739 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 ETV7Q9Y603 341 aa14.08□□□□□ -0.15
SNX17-204ENST00000453453 ANKRD11Q6UB99 2663 aaPredicted RBP14.08□□□□□ -0.16
SNX17-204ENST00000453453 A0A1W2PNV4 684 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 AQP7P3A6NL99 342 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 NPIPA5E9PKD4 350 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 AIPO00170 330 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 CRYABP02511 175 aaKnown RBP14.08□□□□□ -0.16
SNX17-204ENST00000453453 ALDOBP05062 364 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 OR2T7P0C7T2 308 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 CXCL2P19875 107 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 SDHAP31040 664 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 EIF1AXP47813 144 aaKnown RBP14.08□□□□□ -0.16
SNX17-204ENST00000453453 GDI2P50395 445 aaKnown RBP14.08□□□□□ -0.16
SNX17-204ENST00000453453 DAP3P51398 398 aaKnown RBP14.08□□□□□ -0.16
SNX17-204ENST00000453453 RAC3P60763 192 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 TMEM225Q6GV28 225 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 PM20D2Q8IYS1 436 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 OR2T27Q8NH04 317 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 ZNF671Q8TAW3 534 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 LGALS14Q8TCE9 139 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 RPS4Y2Q8TD47 263 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 FCAMRQ8WWV6 532 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 NPIPA1Q9UND3 350 aa14.08□□□□□ -0.16
SNX17-204ENST00000453453 ASPMQ8IZT6 3477 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 MED12Q93074 2177 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 MS4A18H0YCH9 400 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 K7EM74 188 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 XKRYO14609 159 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 VAMP5O95183 116 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 TXNDC12O95881 172 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 PLGP00747 810 aaPredicted RBP14.07□□□□□ -0.16
SNX17-204ENST00000453453 IGHG3P01860 377 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 ZNF708P17019 499 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 FAUP35544 74 aaKnown RBP14.07□□□□□ -0.16
SNX17-204ENST00000453453 VEGFCP49767 419 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 LHX2P50458 406 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 PSMA6P60900 246 aaKnown RBP14.07□□□□□ -0.16
SNX17-204ENST00000453453 RPL27P61353 136 aaKnown RBP14.07□□□□□ -0.16
SNX17-204ENST00000453453 SEC61A1P61619 476 aaKnown RBP14.07□□□□□ -0.16
SNX17-204ENST00000453453 ZNF239Q16600 458 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms