RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 ZNF14P17017 642 aaPredicted RBP15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 DCKP27707 260 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 GZMKP49863 264 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 MVKQ03426 396 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 ST3GAL4Q11206 333 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 THEM4Q5T1C6 240 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 OR6V1Q8N148 313 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 SLC22A24Q8N4F4 322 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 OR52I1Q8NGK6 324 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 OR6K6Q8NGW6 343 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 TMEM80Q96HE8 168 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 RBP7Q96R05 134 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 CNN2Q99439 309 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 DOK1Q99704 481 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 NUAK2Q9H093 628 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 ERVK-18Q9QC07 812 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 EXOGQ9Y2C4 368 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 PCDHGB1Q9Y5G3 927 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 VWC2LB2RUY7 222 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 DCTN6O00399 190 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 DHHO43323 396 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 KHDRBS3O75525 346 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 CLPTM1O96005 669 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 MT-ND2P03891 347 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 OR8G3PP0DMU2 310 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 ATP6V1B1P15313 513 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 ZNF16P17020 682 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 PYCR1P32322 319 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 ZNF133P52736 654 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 ACTC1P68032 377 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 ACTA1P68133 377 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 GLO1Q04760 184 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 TBCEQ15813 527 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 HIST3H3Q16695 136 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 RNLSQ5VYX0 342 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 TMEM154Q6P9G4 183 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 SKA3Q8IX90 412 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 ZCCHC24Q8N2G6 241 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 SYT14Q8NB59 555 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 OR51G2Q8NGK0 314 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 NEU4Q8WWR8 484 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 TSSK2Q96PF2 358 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 CDCA4Q9BXL8 241 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 BEX2Q9BXY8 128 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 RNF121Q9H920 327 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 ADGRL4Q9HBW9 690 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 INPP5EQ9NRR6 644 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 ZNF224Q9NZL3 707 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 CDC42EP3Q9UKI2 254 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 B9D1Q9UPM9 204 aa15.5■□□□□ 0.07
SQSTM1-204ENST00000453046 TMEM129A0AVI4 362 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 SLC16A7O60669 478 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 IGHA1P01876 353 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 ADRA2AP08913 450 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 QDPRP09417 244 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 SBK2P0C263 348 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 PATE4P0C8F1 98 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 ZNF35P13682 527 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 DAOP14920 347 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 MYL12AP19105 171 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 ATP6V1E1P36543 226 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 RPS23P62266 143 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 BLMHQ13867 455 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 IRF3Q14653 427 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 RAB39AQ14964 217 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 LRFN4Q6PJG9 635 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 SPARTQ8N0X7 666 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 OR51L1Q8NGJ5 315 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 MRPL24Q96A35 216 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 ZMYND19Q96E35 227 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 ZNF75AQ96N20 296 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 SH3GL3Q99963 347 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 BPESC1Q9GZL8 116 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 CCDC90BQ9GZT6 254 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 MARCH7Q9H992 704 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 EXOSC1Q9Y3B2 195 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 COMMD3-BMI1R4GMX3 469 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 ATRQ13535 2644 aa15.49■□□□□ 0.07
SQSTM1-204ENST00000453046 J3QRE1 110 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 C21orf33P30042 268 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 GLRXP35754 106 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 ZNF84P51523 738 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 FMODQ06828 376 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 C10orf128Q5T292 105 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 FCGR1BQ92637 280 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 MCHR2Q969V1 340 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 MRPL37Q9BZE1 423 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 SHARPINQ9H0F6 387 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 TPK1Q9H3S4 243 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 SRA1Q9HD15 236 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 TMEM38BQ9NVV0 291 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 KCNS2Q9ULS6 477 aa15.48■□□□□ 0.07
SQSTM1-204ENST00000453046 IGHV4-61A0A0C4DH41 118 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 LOC100289279A0A1B0GTE1 492 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 SYNGR3O43761 229 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 LMX1BO60663 402 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 APOL3O95236 402 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 SERPINA5P05154 406 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 GAAP10253 952 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 EVX1P49640 407 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms