RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 APLNRP35414 380 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 LIPAP38571 399 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 ZNF121P58317 390 aaPredicted RBP12.72□□□□□ -0.37
TNF-208ENST00000449264 NANOS3P60323 173 aaKnown RBP12.72□□□□□ -0.37
TNF-208ENST00000449264 SLC3A1Q07837 685 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 SNTB1Q13884 538 aaKnown RBP12.72□□□□□ -0.37
TNF-208ENST00000449264 CDK5R1Q15078 307 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 ODF4Q2M2E3 257 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 FBXL19-AS1Q494R0 122 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 GPR141Q7Z602 305 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 P2RY8Q86VZ1 359 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 SLC30A7Q8NEW0 376 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
TNF-208ENST00000449264 NIPAL2Q9H841 368 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 ST6GALNAC2Q9UJ37 374 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 HCFC1P51610 2035 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 HEATR1Q9H583 2144 aaKnown RBP12.72□□□□□ -0.37
TNF-208ENST00000449264 LOC100509620A0A075B734 347 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 TRBV2A0A0J9YWF9 115 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 CLDN14O95500 239 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 SERPINA5P05154 406 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 CBR1P16152 277 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 ZNF14P17017 642 aaPredicted RBP12.71□□□□□ -0.37
TNF-208ENST00000449264 GDI2P50395 445 aaKnown RBP12.71□□□□□ -0.37
TNF-208ENST00000449264 ZNF83P51522 516 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 TPTEP56180 551 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 BDH1Q02338 343 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 HGFACQ04756 655 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 ACSM1Q08AH1 577 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 MRPL28Q13084 256 aaKnown RBP12.71□□□□□ -0.37
TNF-208ENST00000449264 RSPO1Q2MKA7 263 aaPredicted RBP12.71□□□□□ -0.37
TNF-208ENST00000449264 WDR38Q5JTN6 314 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 XKRXQ6PP77 449 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 C22orf34Q6ZV56 151 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 PRSS35Q8N3Z0 413 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 ZNF808Q8N4W9 903 aaPredicted RBP12.71□□□□□ -0.37
TNF-208ENST00000449264 OR13F1Q8NGS4 319 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 OR2G2Q8NGZ5 317 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 ZNF75AQ96N20 296 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 MED18Q9BUE0 208 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 FAM206AQ9NX38 181 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 ATPIF1Q9UII2 106 aa12.71□□□□□ -0.37
TNF-208ENST00000449264 SRSF10O75494 262 aaKnown RBP12.7□□□□□ -0.38
TNF-208ENST00000449264 IGKV3-15P01624 115 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 ACSM4P0C7M7 580 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 COX5BP10606 129 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 CPEP16870 476 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 OTX1P32242 354 aaPredicted RBP12.7□□□□□ -0.38
TNF-208ENST00000449264 DCTDP32321 178 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 TGM4P49221 684 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 ALKBH1Q13686 389 aaKnown RBP12.7□□□□□ -0.38
TNF-208ENST00000449264 SSX1Q16384 188 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 TBC1D28Q2M2D7 210 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 CCDC58Q4VC31 144 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 BCL2L15Q5TBC7 163 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 ZNF544Q6NX49 715 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 RPL22L1Q6P5R6 122 aaKnown RBP12.7□□□□□ -0.38
TNF-208ENST00000449264 FAM57BQ71RH2 274 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 NAA40Q86UY6 237 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 WFDC8Q8IUA0 241 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 HAVCR2Q8TDQ0 301 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 PPP1R14AQ96A00 147 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 SMIM19Q96E16 107 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 C4orf45Q96LM5 186 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 PDCD1LG2Q9BQ51 273 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 TMED9Q9BVK6 235 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 ISYNA1Q9NPH2 558 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 NPAP1Q9NZP6 1156 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 FRRS1LQ9P0K9 344 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 SLC22A13Q9Y226 551 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 DOPEY1Q5JWR5 2465 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 CADP27708 2225 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 H3BSH0 61 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 M0R1B8 84 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 CCRL2O00421 344 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 TBX1O43435 398 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 CECR9P0C854 216 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 AGAP20933 346 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 ANOS1P23352 680 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 KIR3DL2P43630 455 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 RGS6P49758 472 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 MMP16P51512 607 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 GFOD2Q3B7J2 385 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 DMKNQ6E0U4 476 aaPredicted RBP12.7□□□□□ -0.38
TNF-208ENST00000449264 DRAM2Q6UX65 266 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 CATSPERDQ86XM0 798 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 EGFL6Q8IUX8 553 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 PHC2Q8IXK0 858 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 PAQR4Q8N4S7 273 aaPredicted RBP12.7□□□□□ -0.38
TNF-208ENST00000449264 TMEM203Q969S6 136 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 PGAM5Q96HS1 289 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 POM121L2Q96KW2 1035 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 USB1Q9BQ65 265 aaKnown RBP12.7□□□□□ -0.38
TNF-208ENST00000449264 PBOV1Q9GZY1 135 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 OR51B6Q9H340 312 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 MOB1AQ9H8S9 216 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 G6PC2Q9NQR9 355 aa12.7□□□□□ -0.38
TNF-208ENST00000449264 IGHV1-18A0A0C4DH31 117 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 APOC1P02654 83 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms