RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 LIPNQ5VXI9 398 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 TMEM108Q6UXF1 575 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 DMRTC2Q8IXT2 367 aaPredicted RBP12.69□□□□□ -0.38
SHANK2-210ENST00000449116 ZNF283Q8N7M2 679 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 HAVCR2Q8TDQ0 301 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 ZNF799Q96GE5 643 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 DOK1Q99704 481 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 CDH20Q9HBT6 801 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 CRIM1Q9NZV1 1036 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 RPP14O95059 124 aaKnown RBP12.68□□□□□ -0.38
SHANK2-210ENST00000449116 RPSAP08865 295 aaKnown RBP12.68□□□□□ -0.38
SHANK2-210ENST00000449116 ACSM4P0C7M7 580 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 CD40P25942 277 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 MAP2K4P45985 399 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 SLC6A9P48067 706 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 EMX1Q04741 257 aaPredicted RBP12.68□□□□□ -0.38
SHANK2-210ENST00000449116 DRAM2Q6UX65 266 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 ACBD4Q8NC06 268 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 ZNF485Q8NCK3 441 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 FAM222BQ8WU58 562 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 GATAD2BQ8WXI9 593 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 PELI1Q96FA3 418 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 ESRP2Q9H6T0 727 aaKnown RBP12.68□□□□□ -0.38
SHANK2-210ENST00000449116 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 ACOT13Q9NPJ3 140 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 BABAM2Q9NXR7 383 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 LSM2Q9Y333 95 aaKnown RBP12.68□□□□□ -0.38
SHANK2-210ENST00000449116 R4GMQ9 66 aa12.68□□□□□ -0.38
SHANK2-210ENST00000449116 IGHV2OR16-5A0A0B4J2B6 119 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 TMEM269A0A1B0GVZ9 245 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 DPRXA6NFQ7 191 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 CLDN1O95832 211 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 CRYAAP02489 173 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 ZNF35P13682 527 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 PCMT1P22061 227 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 MMP16P51512 607 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 GBX2P52951 348 aaPredicted RBP12.67□□□□□ -0.38
SHANK2-210ENST00000449116 ZNF121P58317 390 aaPredicted RBP12.67□□□□□ -0.38
SHANK2-210ENST00000449116 HGFACQ04756 655 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 BSPH1Q075Z2 132 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 MED22Q15528 200 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 BEX5Q5H9J7 111 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 ARL9Q6T311 187 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 MEX3BQ6ZN04 569 aaKnown RBP12.67□□□□□ -0.38
SHANK2-210ENST00000449116 KLBQ86Z14 1044 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 PAQR4Q8N4S7 273 aaPredicted RBP12.67□□□□□ -0.38
SHANK2-210ENST00000449116 RORBQ92753 470 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 C4orf45Q96LM5 186 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 OR5M11Q96RB7 305 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 SPOCK3Q9BQ16 436 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 KCNS3Q9BQ31 491 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 MOB1AQ9H8S9 216 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 SP140LQ9H930 580 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 TRIM36Q9NQ86 728 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 FAM206AQ9NX38 181 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 EIF3KQ9UBQ5 218 aaKnown RBP12.67□□□□□ -0.38
SHANK2-210ENST00000449116 GRIP1Q9Y3R0 1128 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 ANKHD1Q8IWZ3 2542 aaKnown RBP12.67□□□□□ -0.38
SHANK2-210ENST00000449116 PRR14LQ5THK1 2151 aa12.67□□□□□ -0.38
SHANK2-210ENST00000449116 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-210ENST00000449116 ACOD1A6NK06 481 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 TRIM64CA6NLI5 447 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 LOC110117498-PIK3R3F6TDL0 507 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 ICMTO60725 284 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 SRSF10O75494 262 aaKnown RBP12.66□□□□□ -0.38
SHANK2-210ENST00000449116 LCATP04180 440 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 ANXA2P07355 339 aaKnown RBP12.66□□□□□ -0.38
SHANK2-210ENST00000449116 SMIM18P0DKX4 95 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 ATP6V1B1P15313 513 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 CALCRP30988 508 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 PSMB10P40306 273 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 WNT5AP41221 380 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 TGM4P49221 684 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 RGS6P49758 472 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 MFGE8Q08431 387 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-210ENST00000449116 SPHARQ15513 63 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 NCMAPQ5T1S8 102 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 KCTD8Q6ZWB6 473 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 ZNF367Q7RTV3 350 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 PRSS45Q7RTY3 260 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 NAA40Q86UY6 237 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 FCGR1BQ92637 280 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-210ENST00000449116 PLPPR2Q96GM1 343 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 C1QTNF5Q9BXJ0 243 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 TBCCD1Q9NVR7 557 aa12.66□□□□□ -0.38
SHANK2-210ENST00000449116 A1L4Q6 167 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 E9PI62 339 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 J3QW42 95 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 ABCD4O14678 606 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 PNPP00491 289 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 LALBAP00709 142 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 LCKP06239 509 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 SLC2A1P11166 492 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 PCSK6P29122 969 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 GTF2A1P52655 376 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-210ENST00000449116 NR1H2P55055 460 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 TAS2R43P59537 309 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 BDH1Q02338 343 aa12.65□□□□□ -0.38
SHANK2-210ENST00000449116 SPOCK1Q08629 439 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms