RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 A6NNC1 897 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 CYR61O00622 381 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 BLVRBP30043 206 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 RPL27P61353 136 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 FOXL1Q12952 345 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 SSX2Q16385 188 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMEM244Q5VVB8 128 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR2L13Q8N349 312 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 OIT3Q8WWZ8 545 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 APOBEC3DQ96AK3 386 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 CENPNQ96H22 339 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 MAELQ96JY0 434 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ABCB9Q9NP78 766 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLAMF8Q9P0V8 285 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 RSL24D1Q9UHA3 163 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 HMX3A6NHT5 357 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 PRKACBP22694 351 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ALDH3B1P43353 468 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 VDAC2P45880 294 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 TAS2R43P59537 309 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 IL17RELQ6ZVW7 336 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 C9orf40Q8IXQ3 194 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR6V1Q8N148 313 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 FAM156AQ8NDB6 213 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 MIB2Q96AX9 1013 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLC25A44Q96H78 314 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 LURAP1Q96LR2 239 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 IMMP1LQ96LU5 166 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 SIAEQ9HAT2 523 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF701Q9NV72 531 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 MED29Q9NX70 200 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 TRAPPC4Q9Y296 219 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 TRAV27A0A087WT01 109 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR6C6A6NF89 314 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 BHLHE40O14503 412 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 THRBP10828 461 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 HTN3P15516 51 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 GATA4P43694 442 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 SOX2P48431 317 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ARL16Q0P5N6 197 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 PCGF3Q3KNV8 242 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 MEDAGQ5VYS4 303 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 RDH5Q92781 318 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ANKRD9Q96BM1 317 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 TIMP4Q99727 224 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 GON7Q9BXV9 100 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 CST11Q9H112 138 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR52D1Q9H346 318 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ANK1P16157 1881 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLC33A1O00400 549 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 DIRAS3O95661 229 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 CAPGP40121 348 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 SELENOWP63302 87 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 DBX2Q6ZNG2 339 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 Q6ZSR9 355 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 SERPINA11Q86U17 422 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 SDR9C7Q8NEX9 313 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR2T27Q8NH04 317 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 HAVCR2Q8TDQ0 301 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 MUL1Q969V5 352 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ENPP5Q9UJA9 477 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 FCMRO60667 390 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR7A10O76100 309 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 UMODP07911 640 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ARRB2P32121 409 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 GSK3AP49840 483 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 FAM209AQ5JX71 171 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 RPUSD3Q6P087 351 aaKnown RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMEM17Q86X19 198 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ABHD3Q8WU67 409 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ARSGQ96EG1 525 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMUB1Q9BVT8 246 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 SYT4Q9H2B2 425 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 SDHAF2Q9NX18 166 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 GLTPQ9NZD2 209 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ACTR3BQ9P1U1 418 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 MIOXQ9UGB7 285 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 TBC1D24Q9ULP9 559 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ANKRD33BA6NCL7 494 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 KLF7O75840 302 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 OMGP23515 440 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 DDOSTP39656 456 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ACTA2P62736 377 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 GRB2P62993 217 aaKnown RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ACTG2P63267 376 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ADPRMQ3LIE5 342 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 CDC20BQ86Y33 519 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 NPEPL1Q8NDH3 523 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR2M3Q8NG83 312 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 PYDC1Q8WXC3 89 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 MRPS24Q96EL2 167 aaKnown RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 DCLRE1BQ9H816 532 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 MGAT4AQ9UM21 535 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 FAM181BA6NEQ2 426 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 CREBL2O60519 120 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 HTN1P15515 57 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 LMO1P25800 156 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ARL6IP1Q15041 203 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 SRSF7Q16629 238 aaKnown RBP eCLIP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms