RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 DCAF13Q9NV06 445 aaKnown RBP23.71■■□□□ 1.39
CBX4-202ENST00000448310 B9D1Q9UPM9 204 aa23.71■■□□□ 1.39
CBX4-202ENST00000448310 IGHV3OR16-10A0A075B7F0 116 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 F5H5P2 479 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 HKR1P10072 659 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 RPS2P15880 293 aaKnown RBP23.7■■□□□ 1.38
CBX4-202ENST00000448310 SELEP16581 610 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 CRABP1P29762 137 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 CD80P33681 288 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 RSPO1Q2MKA7 263 aaPredicted RBP23.7■■□□□ 1.38
CBX4-202ENST00000448310 LEG1Q6P5S2 330 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 LINC00346Q8IVM7 164 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 FANK1Q8TC84 345 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 DHRS1Q96LJ7 313 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 NMNAT3Q96T66 252 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 SLC30A2Q9BRI3 323 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 SSBP3Q9BWW4 388 aaPredicted RBP23.7■■□□□ 1.38
CBX4-202ENST00000448310 SAMD4AQ9UPU9 718 aaKnown RBP23.7■■□□□ 1.38
CBX4-202ENST00000448310 LRCH1Q9Y2L9 728 aa23.7■■□□□ 1.38
CBX4-202ENST00000448310 PRTN3P24158 256 aa23.69■■□□□ 1.38
CBX4-202ENST00000448310 MDH1P40925 334 aaKnown RBP23.69■■□□□ 1.38
CBX4-202ENST00000448310 SRP9P49458 86 aaKnown RBP23.69■■□□□ 1.38
CBX4-202ENST00000448310 PAX8Q06710 450 aa23.69■■□□□ 1.38
CBX4-202ENST00000448310 COX10Q12887 443 aa23.69■■□□□ 1.38
CBX4-202ENST00000448310 KRT72Q14CN4 511 aa23.69■■□□□ 1.38
CBX4-202ENST00000448310 FAM201AQ5SY85 155 aa23.69■■□□□ 1.38
CBX4-202ENST00000448310 CFAP77Q6ZQR2 320 aa23.69■■□□□ 1.38
CBX4-202ENST00000448310 OR6V1Q8N148 313 aa23.69■■□□□ 1.38
CBX4-202ENST00000448310 ADA2Q9NZK5 511 aa23.69■■□□□ 1.38
CBX4-202ENST00000448310 SOX21Q9Y651 276 aaPredicted RBP23.69■■□□□ 1.38
CBX4-202ENST00000448310 IQCF6A8MYZ5 107 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 IFNL4K9M1U5 179 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 WIPF1O43516 503 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 HLA-DPB1P04440 258 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 IGHV4-38-2P0DP08 117 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 BAMBIQ13145 260 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 PGM2L1Q6PCE3 622 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 JAZF1Q86VZ6 243 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 KLBQ86Z14 1044 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 SLC26A10Q8NG04 563 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 OR4K13Q8NH42 304 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 MS4A7Q9GZW8 240 aaPredicted RBP23.68■■□□□ 1.38
CBX4-202ENST00000448310 OR52D1Q9H346 318 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 FN3KQ9H479 309 aa23.68■■□□□ 1.38
CBX4-202ENST00000448310 HIST1H1CP16403 213 aaKnown RBP23.67■■□□□ 1.38
CBX4-202ENST00000448310 PMELP40967 661 aa23.67■■□□□ 1.38
CBX4-202ENST00000448310 SPIBQ01892 262 aa23.67■■□□□ 1.38
CBX4-202ENST00000448310 PAX2Q02962 417 aa23.67■■□□□ 1.38
CBX4-202ENST00000448310 FOXL1Q12952 345 aa23.67■■□□□ 1.38
CBX4-202ENST00000448310 RFX4Q33E94 735 aa23.67■■□□□ 1.38
CBX4-202ENST00000448310 OR52E2Q8NGJ4 325 aa23.67■■□□□ 1.38
CBX4-202ENST00000448310 TMEM246Q9BRR3 403 aa23.67■■□□□ 1.38
CBX4-202ENST00000448310 SPAG4Q9NPE6 437 aa23.67■■□□□ 1.38
CBX4-202ENST00000448310 RPRD1BQ9NQG5 326 aaKnown RBP23.67■■□□□ 1.38
CBX4-202ENST00000448310 RENP00797 406 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 SLC6A6P31641 620 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 GNB2P62879 340 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 SLC18B1Q6NT16 456 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 NAA40Q86UY6 237 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 PARP8Q8N3A8 854 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 CMTM5Q96DZ9 223 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 ZNF747Q9BV97 191 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 HCAR1Q9BXC0 346 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 MYLK2Q9H1R3 596 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 TMEM100Q9NV29 134 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 PKD1L1Q8TDX9 2849 aa23.66■■□□□ 1.38
CBX4-202ENST00000448310 F5H5K5 113 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 GMNNO75496 209 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 GADD45GO95257 159 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 ACSM4P0C7M7 580 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 FPR3P25089 353 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 KRTAP27-1Q3LI81 207 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 HSP90B2PQ58FF3 399 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 COLCA1Q6ZS62 124 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 TAF15Q92804 592 aaKnown RBP eCLIP23.65■■□□□ 1.38
CBX4-202ENST00000448310 NEIL1Q96FI4 390 aaPredicted RBP23.65■■□□□ 1.38
CBX4-202ENST00000448310 PITX2Q99697 317 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 ELAC2Q9BQ52 826 aaKnown RBP23.65■■□□□ 1.38
CBX4-202ENST00000448310 IFT27Q9BW83 186 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 MIOXQ9UGB7 285 aa23.65■■□□□ 1.38
CBX4-202ENST00000448310 IGHV2-70DA0A0C4DH43 119 aa23.64■■□□□ 1.37
CBX4-202ENST00000448310 ARPC3O15145 178 aa23.64■■□□□ 1.37
CBX4-202ENST00000448310 SEMG1P04279 462 aa23.64■■□□□ 1.37
CBX4-202ENST00000448310 GK2Q14410 553 aaPredicted RBP23.64■■□□□ 1.37
CBX4-202ENST00000448310 ZNF404Q494X3 552 aa23.64■■□□□ 1.37
CBX4-202ENST00000448310 BTNL3Q6UXE8 466 aa23.64■■□□□ 1.37
CBX4-202ENST00000448310 C19orf18Q8NEA5 215 aa23.64■■□□□ 1.37
CBX4-202ENST00000448310 SDR9C7Q8NEX9 313 aa23.64■■□□□ 1.37
CBX4-202ENST00000448310 LRRC30A6NM36 301 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 TMPRSS2O15393 492 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 OR10H3O60404 316 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 MAB21L1Q13394 359 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 ZNF181Q2M3W8 571 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 LRRN1Q6UXK5 716 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 RAB40AQ8WXH6 277 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 DACT3Q96B18 629 aaPredicted RBP23.63■■□□□ 1.37
CBX4-202ENST00000448310 PYURFQ96I23 114 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 ATF6BQ99941 703 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 CDADC1Q9BWV3 514 aa23.63■■□□□ 1.37
CBX4-202ENST00000448310 GORASP2Q9H8Y8 452 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms