RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 C9orf50Q5SZB4 431 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 TTLL10Q6ZVT0 673 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 ZNF248Q8NDW4 579 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 STOML3Q8TAV4 291 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 ASB10Q8WXI3 467 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 MVB12AQ96EY5 273 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 UQCC2Q9BRT2 126 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 PURGQ9UJV8 347 aaKnown RBP17.04■□□□□ 0.32
SDCBP-204ENST00000447182 DBX1A6NMT0 343 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 H3BMH7 237 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 SIGLEC5O15389 551 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 EFSO43281 561 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 ATG12O94817 140 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 DUS4LO95620 317 aaKnown RBP17.03■□□□□ 0.32
SDCBP-204ENST00000447182 PLATP00750 562 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 HLA-DOBP13765 273 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 SIGLEC14Q08ET2 396 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 ATXN7L3Q14CW9 347 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-204ENST00000447182 GVQW1Q8N7I0 195 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 RNF133Q8WVZ7 376 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 DAZLQ92904 295 aaKnown RBP17.03■□□□□ 0.32
SDCBP-204ENST00000447182 NKD1Q969G9 470 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 C8orf33Q9H7E9 229 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-204ENST00000447182 FBLN5Q9UBX5 448 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 PCDHB10Q9UN67 800 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 USP34Q70CQ2 3546 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 NPIPB13A6NJU9 1138 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 NPIPB4C9JG80 1138 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 F5H0A9 414 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-204ENST00000447182 P2RY10O00398 339 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 SOX1O00570 391 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-204ENST00000447182 FGF16O43320 207 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 H2AFB1P0C5Y9 115 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 EFNA3P52797 238 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 FLI1Q01543 452 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-204ENST00000447182 SQSTM1Q13501 440 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 SLC22A24Q8N4F4 322 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 ZNF441Q8N8Z8 693 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-204ENST00000447182 CLEC1BQ9P126 229 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 MKL2Q9ULH7 1088 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 CYP8B1Q9UNU6 501 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 KCNK7Q9Y2U2 307 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 SLCO1B1Q9Y6L6 691 aa17.03■□□□□ 0.32
SDCBP-204ENST00000447182 RP1P56715 2156 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 TRBV6-7A0A0A0MS04 114 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 A0A1W2PPC4 97 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 F8VVB4 439 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 F8VWA3 439 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 MS4A18H0YCH9 400 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 ERCC1P07992 297 aaPredicted RBP17.02■□□□□ 0.32
SDCBP-204ENST00000447182 AVPR2P30518 371 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 HRH1P35367 487 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 MS4A18Q3C1V0 323 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 CCDC157Q569K6 752 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 OR52W1Q6IF63 320 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 LINC00346Q8IVM7 164 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 FGGYQ96C11 551 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 CMBLQ96DG6 245 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 KCNK17Q96T54 332 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 MBD2Q9UBB5 411 aa17.02■□□□□ 0.32
SDCBP-204ENST00000447182 LOC101059948A0A1B0GTJ6 334 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 OR2AT4A6NND4 320 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 CRHP06850 196 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 H2BFMP0C1H6 154 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 DAP3P51398 398 aaKnown RBP17.02■□□□□ 0.31
SDCBP-204ENST00000447182 FMODQ06828 376 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 RHOUQ7L0Q8 258 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 SLC29A4Q7RTT9 530 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.02■□□□□ 0.31
SDCBP-204ENST00000447182 CHST4Q8NCG5 386 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 OR5AP2Q8NGF4 316 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 OR1S2Q8NGQ3 325 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 OR1N1Q8NGS0 311 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 NUDCD2Q8WVJ2 157 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 MRPL38Q96DV4 380 aaKnown RBP17.02■□□□□ 0.31
SDCBP-204ENST00000447182 NARS2Q96I59 477 aaKnown RBP17.02■□□□□ 0.31
SDCBP-204ENST00000447182 FAM206AQ9NX38 181 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 COPS7AQ9UBW8 275 aa17.02■□□□□ 0.31
SDCBP-204ENST00000447182 TMEM218A2RU14 115 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 FAM25EA8MYX2 175 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 ADAM10O14672 748 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 SIGLEC6O43699 453 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 VSIG8P0DPA2 414 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 PSMB6P28072 239 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 OR1M1Q8NGA1 313 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 OR52N4Q8NGI2 321 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 PIK3IP1Q96FE7 263 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 PRELID3BQ9Y3B1 194 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 SEC16AO15027 2179 aa17.01■□□□□ 0.31
SDCBP-204ENST00000447182 LOC100509620A0A075B734 347 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 TEX13DA0A0J9YY54 714 aaPredicted RBP17■□□□□ 0.31
SDCBP-204ENST00000447182 OR6C76A6NM76 312 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 NPIPA5E9PKD4 350 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 ZNF208O43345 1280 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 IL11P20809 199 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 TAS2R31P59538 309 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 NAAAQ02083 359 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 SLC22A6Q4U2R8 563 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 ZNF529Q6P280 563 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms