RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PDE7BQ9NP56 450 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 MMP25Q9NPA2 562 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.5□□□□□ -0.41
VPS52-212ENST00000445902 PHPT1Q9NRX4 125 aaPredicted RBP12.5□□□□□ -0.41
VPS52-212ENST00000445902 TBC1D29Q9UFV1 150 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 GDF2Q9UK05 429 aaPredicted RBP12.5□□□□□ -0.41
VPS52-212ENST00000445902 TIMM10BQ9Y5J6 103 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 LOC101059948A0A1B0GTJ6 334 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 HIDE1A8MVS5 230 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 RAB27BO00194 218 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 CYR61O00622 381 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 GPR37O15354 613 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 NME2P1O60361 137 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 HOXB5P09067 269 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 SMIM10L1P0DMW3 83 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 DRD3P35462 400 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 DVL1P1P54792 670 aaPredicted RBP12.5□□□□□ -0.41
VPS52-212ENST00000445902 ISXQ2M1V0 245 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 BTNL8Q6UX41 500 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 NT5CQ8TCD5 201 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 AQP3Q92482 292 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 SMIM10Q96HG1 83 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 SLC2A8Q9NY64 477 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 ASH2LQ9UBL3 628 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 EMC9Q9Y3B6 208 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 TMEM14AQ9Y6G1 99 aa12.5□□□□□ -0.41
VPS52-212ENST00000445902 OR6A2O95222 327 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 SFTPBP07988 381 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 CX3CR1P49238 355 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 PYY3Q5JQD4 70 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 EEF1A1P5Q5VTE0 462 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 PRSS54Q6PEW0 395 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 TMEM184AQ6ZMB5 413 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 GRASPQ7Z6J2 395 aaPredicted RBP12.49□□□□□ -0.41
VPS52-212ENST00000445902 ZNF383Q8NA42 475 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 CD300LFQ8TDQ1 290 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 TOLLIPQ9H0E2 274 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 ZBP1Q9H171 429 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 TMPRSS5Q9H3S3 457 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 H0YGG7 62 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 APBB3O95704 486 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 ARF3P61204 181 aaPredicted RBP12.49□□□□□ -0.41
VPS52-212ENST00000445902 EGR4Q05215 589 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 PTCRAQ6ISU1 281 aaPredicted RBP12.49□□□□□ -0.41
VPS52-212ENST00000445902 CLEC18BQ6UXF7 455 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 CCL4L1Q8NHW4 92 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 ANKRD9Q96BM1 317 aaPredicted RBP12.49□□□□□ -0.41
VPS52-212ENST00000445902 RSPRY1Q96DX4 576 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 EIF5A2Q9GZV4 153 aaKnown RBP12.49□□□□□ -0.41
VPS52-212ENST00000445902 GDE1Q9NZC3 331 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 SPACA6W5XKT8 324 aa12.49□□□□□ -0.41
VPS52-212ENST00000445902 A0A1W2PP55 124 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 SERINC4A6NH21 518 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 C17orf51A8MQB3 221 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 MPZL1O95297 269 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 PAX6P26367 422 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 CFPP27918 469 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 ZNF616Q08AN1 781 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 ANKRD55Q3KP44 614 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 ZNF679Q8IYX0 411 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 WFIKKN2Q8TEU8 576 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 CTHRC1Q96CG8 243 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 CNTD2Q9H8S5 307 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 POLE3Q9NRF9 147 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 DEC1Q9P2X7 70 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 DMRT1Q9Y5R6 373 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 KPTNQ9Y664 436 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 METTL12A8MUP2 240 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 NPIPB9F8W1W9 429 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 LDLRAD4O15165 306 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 CSTBP04080 98 aaKnown RBP12.48□□□□□ -0.41
VPS52-212ENST00000445902 ADH1AP07327 375 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 HTR5AP47898 357 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 SLC6A9P48067 706 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 SULT1A1P50225 295 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 STARD6P59095 220 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 CYCSP99999 105 aaKnown RBP12.48□□□□□ -0.41
VPS52-212ENST00000445902 ZP2Q05996 745 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 UNC119Q13432 240 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 ERV3-1Q14264 604 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 TOMM20Q15388 145 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 C1QL3Q5VWW1 255 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 OR13C9Q8NGT0 318 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 TMEM230Q96A57 120 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 TM4SF19Q96DZ7 209 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 MARS2Q96GW9 593 aaKnown RBP12.48□□□□□ -0.41
VPS52-212ENST00000445902 SPACA5Q96QH8 159 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 TIMM29Q9BSF4 260 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 C5orf66Q9H5L9 145 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 LRP12Q9Y561 859 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 SLC16A7O60669 478 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 IFNA2P01563 188 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 CSNK1EP49674 416 aaKnown RBP12.48□□□□□ -0.41
VPS52-212ENST00000445902 FHITP49789 147 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 CD226Q15762 336 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 PLPP4Q5VZY2 271 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 FIGLAQ6QHK4 219 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
VPS52-212ENST00000445902 ZNF565Q8N9K5 539 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms