RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 RAB1BQ9H0U4 201 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 NKX1-2Q9UD57 310 aaPredicted RBP12.14□□□□□ -0.47
SSBP3-208ENST00000444533 FZR1Q9UM11 496 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 DSCAMO60469 2012 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 H0YAE9 185 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 TIMM8AO60220 97 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-208ENST00000444533 ANXA2P07355 339 aaKnown RBP12.13□□□□□ -0.47
SSBP3-208ENST00000444533 ACSM4P0C7M7 580 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF250P15622 560 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 SELEP16581 610 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 LIPAP38571 399 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 CAPGP40121 348 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 HSPA13P48723 471 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 PPOXP50336 477 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 ACTC1P68032 377 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 ACTA1P68133 377 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 SPATA46Q5T0L3 261 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 MBNL2Q5VZF2 373 aaKnown RBP12.13□□□□□ -0.47
SSBP3-208ENST00000444533 DEGS2Q6QHC5 323 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF101Q8IZC7 436 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 C8orf59Q8N0T1 100 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-208ENST00000444533 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 ST7LQ8TDW4 575 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 RNF133Q8WVZ7 376 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 FOXC2Q99958 501 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 ADI1Q9BV57 179 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 MRPL37Q9BZE1 423 aaKnown RBP12.13□□□□□ -0.47
SSBP3-208ENST00000444533 GSX2Q9BZM3 304 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 OR2J1Q9GZK6 312 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 PNRC2Q9NPJ4 139 aaKnown RBP12.13□□□□□ -0.47
SSBP3-208ENST00000444533 CYSLTR2Q9NS75 346 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 CGGBP1Q9UFW8 167 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-208ENST00000444533 IKZF2Q9UKS7 526 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 RRP15Q9Y3B9 282 aaKnown RBP12.13□□□□□ -0.47
SSBP3-208ENST00000444533 N6AMT1Q9Y5N5 214 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 APCP25054 2843 aa12.13□□□□□ -0.47
SSBP3-208ENST00000444533 ANKRD17O75179 2603 aaKnown RBP12.12□□□□□ -0.47
SSBP3-208ENST00000444533 H0YJX3 145 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 H7C417 338 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 ENTPD6O75354 484 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF254O75437 659 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 ATP6V1G2O95670 118 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 CD8AP01732 235 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 SBK2P0C263 348 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 OR2T7P0C7T2 308 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 ALOX5APP20292 161 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 CDKN1AP38936 164 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 PTH2RP49190 550 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 CX3CR1P49238 355 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 PRKXP51817 358 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 RIDAP52758 137 aaKnown RBP12.12□□□□□ -0.47
SSBP3-208ENST00000444533 SWI5Q1ZZU3 235 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 SHEQ5VZ18 495 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 C11orf71Q6IPW1 123 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 RFPL4BQ6ZWI9 263 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 MRPL21Q7Z2W9 205 aaKnown RBP12.12□□□□□ -0.47
SSBP3-208ENST00000444533 ENTHD1Q8IYW4 607 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 OR10H4Q8NGA5 316 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 OR2T27Q8NH04 317 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 RHOXF1Q8NHV9 184 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 KLF14Q8TD94 323 aaPredicted RBP12.12□□□□□ -0.47
SSBP3-208ENST00000444533 C1QTNF5Q9BXJ0 243 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 OPA3Q9H6K4 179 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 ADGRL4Q9HBW9 690 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 TAAR3PQ9P1P4 343 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 RPL36Q9Y3U8 105 aaKnown RBP12.12□□□□□ -0.47
SSBP3-208ENST00000444533 HSPE1-MOB4S4R3N1 261 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
SSBP3-208ENST00000444533 AKAP6Q13023 2319 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 IRGMA1A4Y4 181 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 OVOL3O00110 214 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 TBX1O43435 398 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 XRCC2O43543 280 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 FADS2O95864 444 aaKnown RBP12.11□□□□□ -0.47
SSBP3-208ENST00000444533 NGFP01138 241 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 KRT8P05787 483 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 ADRA2AP08913 450 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 RAC2P15153 192 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 CFL1P23528 166 aaKnown RBP12.11□□□□□ -0.47
SSBP3-208ENST00000444533 OPRL1P41146 370 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 CXCR4P61073 352 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 EGR3Q06889 387 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF829Q3KNS6 432 aaPredicted RBP12.11□□□□□ -0.47
SSBP3-208ENST00000444533 KLHL22Q53GT1 634 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF691Q5VV52 312 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF322Q6U7Q0 402 aaPredicted RBP12.11□□□□□ -0.47
SSBP3-208ENST00000444533 FAM220AQ7Z4H9 259 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF679Q8IYX0 411 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 OR52H1Q8NGJ2 320 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 OR10S1Q8NGN2 331 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 UBE2FQ969M7 185 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 RNFT2Q96EX2 444 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 MARS2Q96GW9 593 aaKnown RBP12.11□□□□□ -0.47
SSBP3-208ENST00000444533 DOK1Q99704 481 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 OR10A2Q9H208 303 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF701Q9NV72 531 aaPredicted RBP12.11□□□□□ -0.47
SSBP3-208ENST00000444533 PTTG3PQ9NZH4 202 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 STARD10Q9Y365 291 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 FBN2P35556 2912 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms