RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 OR5L1Q8NGL2 311 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 LHX4Q969G2 390 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 BPIFA2Q96DR5 249 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 DPAGT1Q9H3H5 408 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 TMEM100Q9NV29 134 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 TEX13CA0A0J9YWL9 993 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 H7C1C5 153 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 AHCYL1O43865 530 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 HLA-DPB1P04440 258 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 FUT4P22083 530 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 FPR3P25089 353 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 CD200P41217 278 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 LSM6P62312 80 aaKnown RBP11.87□□□□□ -0.51
HMGN1-208ENST00000443046 LCN6P62502 163 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 HOXA4Q00056 320 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-208ENST00000443046 FAM189A2Q15884 450 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 RSPO1Q2MKA7 263 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-208ENST00000443046 VMACQ2NL98 169 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 C11orf91Q3C1V1 193 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 ANKDD1AQ495B1 522 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 METTL11BQ5VVY1 283 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 OR10A6Q8NH74 314 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 LRTOMTQ8WZ04 291 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 APOBEC3DQ96AK3 386 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-208ENST00000443046 C7orf26Q96N11 449 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 TECTBQ96PL2 329 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 SMURF1Q9HCE7 757 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 ERVK-18Q9QC07 812 aa11.87□□□□□ -0.51
HMGN1-208ENST00000443046 GPR37O15354 613 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 SHOX2O60902 331 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-208ENST00000443046 FAM20BO75063 409 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 PTBP3O95758 552 aaKnown RBP11.86□□□□□ -0.51
HMGN1-208ENST00000443046 IFI30P13284 250 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 IRF2P14316 349 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 CTLA4P16410 223 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 HIST1H3AP68431 136 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 EGR3Q06889 387 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 MPPED2Q15777 294 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 MESTQ5EB52 335 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 HIST2H3PS2Q5TEC6 136 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 DHRS7BQ6IAN0 325 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-208ENST00000443046 HIST2H3AQ71DI3 136 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 CROCCP2Q86T23 111 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 BHLHE23Q8NDY6 225 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 OR51A7Q8NH64 312 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 PPP1R14AQ96A00 147 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 ZNRD1Q9P1U0 126 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 FBLN5Q9UBX5 448 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 VPREB3Q9UKI3 123 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 BAG5Q9UL15 447 aa11.86□□□□□ -0.51
HMGN1-208ENST00000443046 TRAV27A0A087WT01 109 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 PRSS37A4D1T9 235 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 LGALS8O00214 317 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 RER1O15258 196 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 ZNF26P17031 533 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-208ENST00000443046 TGFBR2P37173 567 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 OR1E2P47887 323 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 LOXL3P58215 753 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 ARF6P62330 175 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 HERPUD1Q15011 391 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 KCNJ8Q15842 424 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 KCNMB1Q16558 191 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 KRTAP27-1Q3LI81 207 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 OTPQ5XKR4 325 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 FAM122BQ7Z309 247 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 GALNT4Q8N4A0 578 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 SCCPDHQ8NBX0 429 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 OR11L1Q8NGX0 322 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 NPRL2Q8WTW4 380 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 CFHR4Q92496 578 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 ECSITQ9BQ95 431 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 RNF7Q9UBF6 113 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 A4GNTQ9UNA3 340 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 NDUFAF1Q9Y375 327 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 ADAM18Q9Y3Q7 739 aa11.85□□□□□ -0.51
HMGN1-208ENST00000443046 NDUFA2O43678 99 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 CD14P08571 375 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 PRKCDQ05655 676 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 ST3GAL3Q11203 375 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 GK2Q14410 553 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-208ENST00000443046 PRAMEF6Q5VXH4 476 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 SLC35E4Q6ICL7 350 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 METAP1DQ6UB28 335 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-208ENST00000443046 OAFQ86UD1 273 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 CALHM3Q86XJ0 350 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 GLB1L2Q8IW92 636 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 Q96M85 177 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 COQ7Q99807 217 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 RASSF4Q9H2L5 321 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 MMADHCQ9H3L0 296 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-208ENST00000443046 RABEP2Q9H5N1 569 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 WDR76Q9H967 626 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 UFSP2Q9NUQ7 469 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 NKIRAS1Q9NYS0 192 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 GRHPRQ9UBQ7 328 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 KPTNQ9Y664 436 aa11.84□□□□□ -0.51
HMGN1-208ENST00000443046 ADAM20O43506 726 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 OR10H3O60404 316 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 ECDO95905 644 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-208ENST00000443046 FBP1P09467 338 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms