RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ZNF551Q7Z340 670 aaPredicted RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 C10orf111Q8N326 155 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 ATP6V1C2Q8NEY4 427 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 OR5W2Q8NH69 310 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 BBS10Q8TAM1 723 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 NANOS1Q8WY41 292 aaKnown RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 MYDGFQ969H8 173 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 PITX2Q99697 317 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 CITED2Q99967 270 aaPredicted RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 MRPL37Q9BZE1 423 aaKnown RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 SLC19A3Q9BZV2 496 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 LAT2Q9GZY6 243 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 OBP2BQ9NPH6 170 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 B3GAT2Q9NPZ5 323 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 SLC6A13Q9NSD5 602 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 FLRT3Q9NZU0 649 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 SLC13A4Q9UKG4 626 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 ICAM5Q9UMF0 924 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 LAMP3Q9UQV4 416 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 VDAC3Q9Y277 283 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 AMDHD2Q9Y303 409 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 TRBV23-1A0A0A0MS06 115 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 FAM240BA0A1B0GVZ2 78 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 A0A1W2PQL4 384 aaPredicted RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 GXYLT2A0PJZ3 443 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 RNF223E7ERA6 249 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 NPIPB9F8W1W9 429 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 SCAF4O95104 1147 aaKnown RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 TSPAN19P0C672 248 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 NR2F1P10589 423 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 PRG2P13727 222 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 APEHP13798 732 aaKnown RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 ETFAP13804 333 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 APOBEC1P41238 236 aaKnown RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 SLC16A1P53985 500 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 CDH11P55287 796 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 MXD1Q05195 221 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 DYRK1AQ13627 763 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 OCLNQ16625 522 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 LCN1P1Q5VSP4 162 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 CYB5R2Q6BCY4 276 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 PTOV1Q86YD1 416 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 ZDHHC21Q8IVQ6 265 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 FBXL14Q8N1E6 418 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 OR4C3Q8NH37 302 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 OR5AK3PQ8NH89 298 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 NFKBIDQ8NI38 313 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 PIGXQ8TBF5 258 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 GPR119Q8TDV5 335 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 GEMIN6Q8WXD5 167 aaKnown RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 SLC25A36Q96CQ1 311 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 DIRAS2Q96HU8 199 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 TAPBPLQ9BX59 468 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 RTN4RQ9BZR6 473 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 EXOSC4Q9NPD3 245 aaKnown RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 GSN-AS1Q9NRJ2 163 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 CISD1Q9NZ45 108 aaKnown RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 GLS2Q9UI32 602 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 ING4Q9UNL4 249 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 HDGFL3Q9Y3E1 203 aa5.29□□□□□ -1.56
PTPRR-204ENST00000440835 SAMHD1Q9Y3Z3 626 aaKnown RBP5.29□□□□□ -1.56
PTPRR-204ENST00000440835 ZNF469Q96JG9 3925 aaPredicted RBP5.28□□□□□ -1.56
PTPRR-204ENST00000440835 PCNX3Q9H6A9 2034 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 IQCMA0A1B0GVH7 501 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 OR5H1A6NKK0 313 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 A8MXK9 166 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 NUDT19A8MXV4 375 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 M0R129 80 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 LYRM1O43325 122 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 DOK2O60496 412 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 SELENOFO60613 162 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 PMS2P2O95744 297 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 ADAP00813 363 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 IGHV4-39P01824 125 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 CXCL3P19876 107 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 PGCP20142 388 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 HNF1AP20823 631 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 RORCP51449 518 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 ST3GAL4Q11206 333 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 NPRL3Q12980 569 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 MED22Q15528 200 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 ZNF141Q15928 474 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 DUSP5Q16690 384 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 ZSWIM7Q19AV6 140 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 PGGHGQ32M88 737 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 HSD17B12Q53GQ0 312 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 KLHL22Q53GT1 634 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 HES5Q5TA89 166 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 C11orf71Q6IPW1 123 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 C22orf34Q6ZV56 151 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 ATG16L2Q8NAA4 619 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 NANPQ8TBE9 248 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 TPD52L3Q96J77 140 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 HSH2DQ96JZ2 352 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 TNFRSF13CQ96RJ3 184 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 MGLLQ99685 303 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 OR51V1Q9H2C8 321 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 REEP1Q9H902 201 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 ANKRA2Q9H9E1 313 aa5.28□□□□□ -1.56
PTPRR-204ENST00000440835 FKRPQ9H9S5 495 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms