RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ZMAT1Q5H9K5 638 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 NAA40Q86UY6 237 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 ZNF511Q8NB15 262 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 PAPD5Q8NDF8 572 aaKnown RBP11.67□□□□□ -0.54
LTBR-202ENST00000440421 OR2Z1Q8NG97 314 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 OR5L1Q8NGL2 311 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 OR6K6Q8NGW6 343 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 CCL17Q92583 94 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 HPS1Q92902 700 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 APOBEC3DQ96AK3 386 aaPredicted RBP11.67□□□□□ -0.54
LTBR-202ENST00000440421 HAVCR1Q96D42 359 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 ELMOD3Q96FG2 381 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 NMNAT2Q9BZQ4 307 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 EGLN1Q9GZT9 426 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 ZNF556Q9HAH1 456 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 CMC2Q9NRP2 79 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 ZDHHC8Q9ULC8 765 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 COMMD3-BMI1R4GMX3 469 aa11.67□□□□□ -0.54
LTBR-202ENST00000440421 ABCA2Q9BZC7 2435 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 KIAA1324LA8MWY0 1029 aaPredicted RBP11.66□□□□□ -0.54
LTBR-202ENST00000440421 CLDN25C9JDP6 229 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 LCATP04180 440 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 ADH4P08319 380 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 ACSM4P0C7M7 580 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 RAC2P15153 192 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 IGFBP5P24593 272 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 RBMXP38159 391 aaKnown RBP11.66□□□□□ -0.54
LTBR-202ENST00000440421 PRSS12P56730 875 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 ECH1Q13011 328 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 CDK5R2Q13319 367 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 GINS1Q14691 196 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 KRTAP27-1Q3LI81 207 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 OR2T2Q6IF00 324 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 ACSM5Q6NUN0 579 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 Q6ZR03 302 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 IL17RELQ6ZVW7 336 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 DCXRQ7Z4W1 244 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 LINC01356Q8N9X3 169 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 ATG16L2Q8NAA4 619 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 OR10S1Q8NGN2 331 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 DIRC2Q96SL1 478 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 HCAR1Q9BXC0 346 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 BEX2Q9BXY8 128 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 SHARPINQ9H0F6 387 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 CDC42EP3Q9UKI2 254 aa11.66□□□□□ -0.54
LTBR-202ENST00000440421 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 J3QW42 95 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 ZNF593O00488 134 aaPredicted RBP11.65□□□□□ -0.54
LTBR-202ENST00000440421 ATP5HO75947 161 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 CD55P08174 381 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 OSMP13725 252 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 ANXA8P13928 327 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 ENTPD1P49961 510 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 CDH15P55291 814 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 C1orf146Q5VVC0 180 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 SLC27A4Q6P1M0 643 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 FBXW12Q6X9E4 464 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 SPATC1Q76KD6 591 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 ZNF771Q7L3S4 317 aaPredicted RBP11.65□□□□□ -0.54
LTBR-202ENST00000440421 TIMD4Q96H15 378 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 C1QTNF5Q9BXJ0 243 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 OR51V1Q9H2C8 321 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 NTN4Q9HB63 628 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 LPAR2Q9HBW0 351 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 CENPMQ9NSP4 180 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 TMEM160Q9NX00 188 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 WIPI2Q9Y4P8 454 aa11.65□□□□□ -0.54
LTBR-202ENST00000440421 FAM157AC9JC47 383 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 M0R135 149 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 DEAF1O75398 565 aaPredicted RBP11.64□□□□□ -0.55
LTBR-202ENST00000440421 PAICSP22234 425 aaKnown RBP11.64□□□□□ -0.55
LTBR-202ENST00000440421 TNFSF4P23510 183 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 SLC6A9P48067 706 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 TPTEP56180 551 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 TAF13Q15543 124 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 FAM120AOSQ5T036 256 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 LINC01590Q5TEZ4 76 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 TMEM236Q5W0B7 351 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 PLBD1Q6P4A8 553 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 SHQ1Q6PI26 577 aaKnown RBP11.64□□□□□ -0.55
LTBR-202ENST00000440421 COLCA1Q6ZS62 124 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 BHLHE23Q8NDY6 225 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 RAB1CQ92928 201 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 SPTSSAQ969W0 71 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 SLAMF6Q96DU3 332 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 ZNF799Q96GE5 643 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 ZNF582Q96NG8 517 aaPredicted RBP11.64□□□□□ -0.55
LTBR-202ENST00000440421 COPS4Q9BT78 406 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 DCAF16Q9NXF7 216 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 KIF17Q9P2E2 1029 aa11.64□□□□□ -0.55
LTBR-202ENST00000440421 ISPDA4D126 451 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 PRR23D1E9PI22 279 aaPredicted RBP11.63□□□□□ -0.55
LTBR-202ENST00000440421 PRR23D2P0DMB1 279 aaPredicted RBP11.63□□□□□ -0.55
LTBR-202ENST00000440421 GSTT1P30711 240 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 PRKXP51817 358 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 BLVRAP53004 296 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 LMO4P61968 165 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 CDK5Q00535 292 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 MALLQ13021 153 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 EIF2B1Q14232 305 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms