RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ZNF584Q8IVC4 421 aa18■□□□□ 0.47
CHD3-204ENST00000439235 SLC30A7Q8NEW0 376 aa18■□□□□ 0.47
CHD3-204ENST00000439235 SP140LQ9H930 580 aa18■□□□□ 0.47
CHD3-204ENST00000439235 GTF2A1LQ9UNN4 478 aa18■□□□□ 0.47
CHD3-204ENST00000439235 ESPL1Q14674 2120 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 ACOD1A6NK06 481 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 CYSRT1A8MQ03 144 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 E9PI62 339 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 SRSF10O75494 262 aaKnown RBP17.99■□□□□ 0.47
CHD3-204ENST00000439235 AGFG2O95081 481 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 PLA2G2AP14555 144 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 SLC6A9P48067 706 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 MFGE8Q08431 387 aaPredicted RBP17.99■□□□□ 0.47
CHD3-204ENST00000439235 ALKBH1Q13686 389 aaKnown RBP17.99■□□□□ 0.47
CHD3-204ENST00000439235 DOC2BQ14184 412 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 CDK5R1Q15078 307 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 TSTQ16762 297 aaKnown RBP17.99■□□□□ 0.47
CHD3-204ENST00000439235 SLC7A6Q92536 515 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 POM121L2Q96KW2 1035 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 FAM206AQ9NX38 181 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 ST6GALNAC2Q9UJ37 374 aa17.99■□□□□ 0.47
CHD3-204ENST00000439235 RP1L1Q8IWN7 2480 aaPredicted RBP17.98■□□□□ 0.47
CHD3-204ENST00000439235 TRBV2A0A0J9YWF9 115 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 C5orf49A4QMS7 147 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 OGG1O15527 345 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 IGLV1-44P01699 117 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 ANXA2P07355 339 aaKnown RBP17.98■□□□□ 0.47
CHD3-204ENST00000439235 DBHP09172 617 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 ACSM4P0C7M7 580 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 CPEP16870 476 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 TTKP33981 857 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 CCR9P51686 369 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 GTF2A1P52655 376 aaPredicted RBP17.98■□□□□ 0.47
CHD3-204ENST00000439235 ZNF121P58317 390 aaPredicted RBP17.98■□□□□ 0.47
CHD3-204ENST00000439235 TFF3Q07654 80 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 GPR50Q13585 617 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 TPBGQ13641 420 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 BCL2L15Q5TBC7 163 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 GPR141Q7Z602 305 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 ZFP41Q8N8Y5 198 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 OR2G2Q8NGZ5 317 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 SMIM19Q96E16 107 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 MS4A3Q96HJ5 214 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 C4orf45Q96LM5 186 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 MED18Q9BUE0 208 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 C1QTNF6Q9BXI9 259 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 CDH20Q9HBT6 801 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 NDRG3Q9UGV2 375 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 OR52A1Q9UKL2 312 aa17.98■□□□□ 0.47
CHD3-204ENST00000439235 LOC100509620A0A075B734 347 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 CCRL2O00421 344 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 PNPP00491 289 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 CELP19835 753 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 RGS6P49758 472 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 RSPO1Q2MKA7 263 aaPredicted RBP17.97■□□□□ 0.47
CHD3-204ENST00000439235 WDR38Q5JTN6 314 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 LIPKQ5VXJ0 399 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 DMKNQ6E0U4 476 aaPredicted RBP17.97■□□□□ 0.47
CHD3-204ENST00000439235 ARL9Q6T311 187 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 CATSPERDQ86XM0 798 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 OR13F1Q8NGS4 319 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 RPS4Y2Q8TD47 263 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 RNF166Q96A37 237 aaPredicted RBP17.97■□□□□ 0.47
CHD3-204ENST00000439235 COMMD4Q9H0A8 199 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 NGBQ9NPG2 151 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 BRD7Q9NPI1 651 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 NUFIP1Q9UHK0 495 aaKnown RBP17.97■□□□□ 0.47
CHD3-204ENST00000439235 MAST4O15021 2626 aa17.97■□□□□ 0.47
CHD3-204ENST00000439235 IGHV1-18A0A0C4DH31 117 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 PNMA8CA0A1B0GUJ8 204 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 TMEM212A6NML5 194 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 PLPP2O43688 288 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 CD1AP06126 327 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 CELA3BP08861 270 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 CECR9P0C854 216 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 CD53P19397 219 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 CCNOP22674 350 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 PEX19P40855 299 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 ZNF83P51522 516 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 NANOS3P60323 173 aaKnown RBP17.96■□□□□ 0.47
CHD3-204ENST00000439235 ALKBH2Q6NS38 261 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 FAM57BQ71RH2 274 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 WFDC8Q8IUA0 241 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 PHC2Q8IXK0 858 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 IL17RDQ8NFM7 739 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 OR52H1Q8NGJ2 320 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 PGAM5Q96HS1 289 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 PBOV1Q9GZY1 135 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 FRRS1LQ9P0K9 344 aa17.96■□□□□ 0.47
CHD3-204ENST00000439235 SIRT4Q9Y6E7 314 aaPredicted RBP17.96■□□□□ 0.47
CHD3-204ENST00000439235 KALRNO60229 2985 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 M0R1B8 84 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 GPRIN2O60269 458 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 LCATP04180 440 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 SLC2A1P11166 492 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 LIPAP38571 399 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 SLC3A1Q07837 685 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 ZNF704Q6ZNC4 412 aaPredicted RBP17.95■□□□□ 0.46
CHD3-204ENST00000439235 ELMOD2Q8IZ81 293 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 PRSS35Q8N3Z0 413 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms