RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 TSSK2Q96PF2 358 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 RBP7Q96R05 134 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 NR1H4Q96RI1 486 aaPredicted RBP7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 SOX7Q9BT81 388 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 ULBP2Q9BZM5 246 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 NMNAT2Q9BZQ4 307 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 SYT4Q9H2B2 425 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 RERGLQ9H628 205 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 SRA1Q9HD15 236 aaKnown RBP7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 SCN3BQ9NY72 215 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 VSX1Q9NZR4 365 aaPredicted RBP7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 MYRFQ9Y2G1 1151 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 WNK2Q9Y3S1 2297 aa7.91□□□□□ -1.14
AC011228.1-201ENST00000439027 SNTNA6NMZ2 147 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 PTGES3LE9PB15 166 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 SLC1A7O00341 560 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 DCTN6O00399 190 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 PRODHO43272 600 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 SYNGR3O43761 229 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 AHCYL1O43865 530 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 SLC16A7O60669 478 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 RAB36O95755 333 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 PGA4P0DJD7 388 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 PGA3P0DJD8 388 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 SPI1P17947 270 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 HTR1FP30939 366 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 IL2RGP31785 369 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 PYCR1P32322 319 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 CSNK1A1P48729 337 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 CENPAP49450 140 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 SLC25A1P53007 311 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 CXCR4P61073 352 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 RAB1AP62820 205 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 CSNK2BP67870 215 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 GALK2Q01415 458 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 ZNF91Q05481 1191 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 FMODQ06828 376 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 RBM48Q5RL73 367 aaKnown RBP7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 GID4Q8IVV7 300 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 OR6V1Q8N148 313 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 NOXO1Q8NFA2 376 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 PROKR2Q8NFJ6 384 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 OR51L1Q8NGJ5 315 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 GGHQ92820 318 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 RFKQ969G6 155 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 TEAD3Q99594 435 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 SYT3Q9BQG1 590 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 ALG12Q9BV10 488 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 MRPL13Q9BYD1 178 aaKnown RBP7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 YTHDF1Q9BYJ9 559 aaKnown RBP7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 MRPL37Q9BZE1 423 aaKnown RBP7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 NUAK2Q9H093 628 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 PLCXD1Q9NUJ7 323 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 B3GNT2Q9NY97 397 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 FZR1Q9UM11 496 aa7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 RPL36Q9Y3U8 105 aaKnown RBP7.9□□□□□ -1.14
AC011228.1-201ENST00000439027 CCDC182A6NF36 153 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 SLC22A31A6NKX4 558 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 M0R233 179 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 TNFAIP8O95379 198 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 QDPRP09417 244 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 TACSTD2P09758 323 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 CCDC159P0C7I6 412 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 PATE4P0C8F1 98 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 DBTP11182 482 aaKnown RBP7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 CTLA4P16410 223 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 SLC2A5P22732 501 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 CRHBPP24387 322 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 EEF1B2P24534 225 aaKnown RBP7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 CRABP1P29762 137 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 ALDH3B1P43353 468 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 MTNR1AP48039 350 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 RAB39AQ14964 217 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 THEM4Q5T1C6 240 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 OR6K6Q8NGW6 343 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 OR2T4Q8NH00 348 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 ZNRF4Q8WWF5 429 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 SGCDQ92629 289 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 NSMAFQ92636 917 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 TMEM54Q969K7 222 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 MCHR2Q969V1 340 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 MRPL24Q96A35 216 aaKnown RBP7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 NMD3Q96D46 503 aaKnown RBP7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 ZMYND19Q96E35 227 aaPredicted RBP7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 RNFT2Q96EX2 444 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 FOXB1Q99853 325 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 NARFLQ9H6Q4 476 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 GLTPQ9NZD2 209 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 WARS2Q9UGM6 360 aaKnown RBP7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 PSORS1C1Q9UIG5 152 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 DUSP13Q9UII6 198 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 BLOC1S6Q9UL45 172 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 B9D1Q9UPM9 204 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 TPRKBQ9Y3C4 175 aa7.89□□□□□ -1.15
AC011228.1-201ENST00000439027 IGLV1-36A0A0B4J1U3 117 aa7.88□□□□□ -1.15
AC011228.1-201ENST00000439027 IGKV1D-43A0A0B4J1Z2 117 aa7.88□□□□□ -1.15
AC011228.1-201ENST00000439027 A0A1W2PPW3 197 aa7.88□□□□□ -1.15
AC011228.1-201ENST00000439027 EFCAB10A6NFE3 127 aa7.88□□□□□ -1.15
AC011228.1-201ENST00000439027 TVP23AA6NH52 213 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms