RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 RNF115Q9Y4L5 304 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 TRBV7-9A0A0J9YWB2 115 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 LINC00854A0A1B0GVQ3 168 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 FAM240BA0A1B0GVZ2 78 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PVALEFA0A1B0GWK0 134 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 SH3PXD2BA1X283 911 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 NCF1BA6NI72 391 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 NCF1CA8MVU1 366 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 SLC17A2O00624 439 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 DYNC1I1O14576 645 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 SH2D1BO14796 132 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 XPO1O14980 1071 aaKnown RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF264O43296 627 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 MED7O43513 233 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 STX10O60499 249 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 CIB2O75838 187 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PLEKHA8P1O95397 391 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 STAMBPO95630 424 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 OTCP00480 354 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 AGTP01019 485 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 CD8AP01732 235 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 KRT14P02533 472 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 MSMBP08118 114 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 TPM1P09493 284 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 SLC35G4P0C7Q5 338 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 EPB41P11171 864 aaKnown RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 FOLR1P15328 257 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF44P15621 663 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 TNNI3P19429 210 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 TAGLN2P37802 199 aaKnown RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 EMDP50402 254 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF136P52737 540 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PRRX1P54821 245 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 TPM4P67936 248 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 MYBPC1Q00872 1141 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 MYL5Q02045 173 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 HSF2Q03933 536 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ITGB3BPQ13352 177 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 SNTB2Q13425 540 aaKnown RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZMYND11Q15326 602 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 STK11Q15831 433 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 HADHQ16836 314 aaKnown RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 TPD52L1Q16890 204 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PGGHGQ32M88 737 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 NKAIN1Q4KMZ8 207 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 CYBRD1Q53TN4 286 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PIP5KL1Q5T9C9 394 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ARMC12Q5T9G4 340 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PRAMEF7Q5VXH5 474 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 STEAP1BQ6NZ63 245 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 LRRC8BQ6P9F7 803 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 WDR88Q6ZMY6 472 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 DPY19L2P2Q6ZN68 376 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PRSS48Q7RTY5 328 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 TMEM179BQ7Z7N9 219 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 YRDCQ86U90 279 aaKnown RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 GPBP1Q86WP2 473 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PSTKQ8IV42 348 aaKnown RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 MISPQ8IVT2 679 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 VSTM4Q8IW00 320 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PDCL2Q8N4E4 241 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 RNF10Q8N5U6 811 aaKnown RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 BBOF1Q8ND07 529 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 BHLHE23Q8NDY6 225 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR52B4Q8NGK2 314 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 RAB3IL1Q8TBN0 382 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 DNAJA4Q8WW22 397 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 SELENOMQ8WWX9 145 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ITFG2Q969R8 447 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 TMEM45BQ96B21 275 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 NRBF2Q96F24 287 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PAGE5Q96GU1 130 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 CAPZA3Q96KX2 299 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ATP6V1G3Q96LB4 118 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 SENP8Q96LD8 212 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 FAM210AQ96ND0 272 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ACCSQ96QU6 501 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 PANX2Q96RD6 677 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 KLF6Q99612 283 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 BCL7BQ9BQE9 202 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 NDUFAF3Q9BU61 184 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ALG12Q9BV10 488 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 DEFB127Q9H1M4 99 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 TMEM231Q9H6L2 316 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 SUDS3Q9H7L9 328 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 C6orf50Q9HD87 102 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 RPRD1BQ9NQG5 326 aaKnown RBP1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 FAIMQ9NVQ4 179 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 RMND1Q9NWS8 449 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 RWDD2AQ9UIY3 292 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 CRLS1Q9UJA2 301 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 GGA2Q9UJY4 613 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF221Q9UK13 617 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 CLEC4AQ9UMR7 237 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 MGAT4BQ9UQ53 548 aa1.58□□□□□ -2.16
HMGB1P18-201ENST00000438801 A0A075B6Q4 140 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 KIR2DL5BA0A0G2JN68 375 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 KIR2DL5BA0A0G2JPC4 375 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 A0A1B0GUA9 196 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 GOLGA8OA6NCC3 632 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms