RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PIGCQ92535 297 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 FAM3DQ96BQ1 224 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 HERV-K104P61576 105 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 MC2RQ01718 297 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 UNQ6126/PRO20091Q6UXV3 157 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 PXKQ7Z7A4 578 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 NAXDQ8IW45 347 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR6V1Q8N148 313 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 OTOSQ8NHW6 89 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 APOBEC4Q8WW27 367 aaKnown RBP10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 DEFB127Q9H1M4 99 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 HRH4Q9H3N8 390 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 PPP1R3EQ9H7J1 279 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 PLA2G3Q9NZ20 509 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 NUBP2Q9Y5Y2 271 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 PLXND1Q9Y4D7 1925 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 SPAARA0A1B0GVQ0 90 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 LEUTXA8MZ59 168 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 SELENOVP59797 346 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 SLC25A30Q5SVS4 291 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 ADGRG3Q86Y34 549 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 C17orf47Q8NEP4 570 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 HSD17B8Q92506 261 aa10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 EIF5A2Q9GZV4 153 aaKnown RBP10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 PARP12Q9H0J9 701 aaKnown RBP10.39□□□□□ -0.75
TRAPPC9-202ENST00000438773 A0A0A6YYH2 397 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 FITM1A5D6W6 292 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 NAP1L6A6NFF2 107 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 A6NJ64 397 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 FBXO24O75426 580 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 SERPINA5P05154 406 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 RD3LP0DJH9 198 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 SERPINA2P20848 420 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CLDN15P56746 228 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 FZD5Q13467 585 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 TOR2AQ5JU69 321 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF546Q86UE3 836 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 BMPERQ8N8U9 685 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 MED18Q9BUE0 208 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 SF3B6Q9Y3B4 125 aaKnown RBP10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 RHBDD3Q9Y3P4 386 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 PLXNB3Q9ULL4 1909 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 AKAP6Q13023 2319 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 A0A0A6YYJ9 748 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF850A8MQ14 1090 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 F5H5P2 479 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 MKRN2OSH3BPM6 223 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 K7ESF4 209 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CCSO14618 274 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZIC2O95409 532 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CSF1P09603 554 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CTLA4P16410 223 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 THBS2P35442 1172 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 EVX1P49640 407 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 C19orf57Q0VDD7 668 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 SLC10A1Q14973 349 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 NPEPL1Q8NDH3 523 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF680Q8NEM1 530 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CT55Q8WUE5 264 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 MAFIPQ8WZ33 124 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ROBO4Q8WZ75 1007 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF845Q96IR2 970 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CCDC86Q9H6F5 360 aaKnown RBP10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 PLEKHJ1Q9NW61 149 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 STEAP1Q9UHE8 339 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 TRABD2BA6NFA1 517 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF587BE7ETH6 402 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 SGCEO43556 437 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZFPL1O95159 310 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 SERPINA7P05543 415 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ABOP16442 354 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CDAP32320 146 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF93P35789 620 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF169Q14929 603 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 METTL11BQ5VVY1 283 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 TMEM81Q6P7N7 255 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 TMEM88Q6PEY1 159 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR6M1Q8NGM8 313 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR51E1Q8TCB6 317 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 C11orf40Q8WZ69 217 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 FAM131CQ96AQ9 280 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 DERL3Q96Q80 235 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR8B4Q96RC9 309 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ACKR4Q9NPB9 350 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 PIEZO1Q92508 2521 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 TTLL8A6PVC2 850 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 PLPP3O14495 311 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 PLPP2O43688 288 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 SC5DO75845 299 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 IFNA21P01568 189 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF35P13682 527 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 PSMB1P20618 241 aaKnown RBP10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ACHEP22303 614 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 TUBG1P23258 451 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CD34P28906 385 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 MAGEB1P43366 347 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 MTCP1P56278 107 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 GRB2P62993 217 aaKnown RBP10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CXADRP78310 365 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms