RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 PRKXP51817 358 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 TPTEP56180 551 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 KLF3P57682 345 aaPredicted RBP13.86□□□□□ -0.19
SNRPB-202ENST00000438552 ALKBH6Q3KRA9 238 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 TMEM255AQ5JRV8 349 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 UNQ6126/PRO20091Q6UXV3 157 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 NAA40Q86UY6 237 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 SLC35F2Q8IXU6 374 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF454Q8N9F8 522 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 SYNPRQ8TBG9 265 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 RFKQ969G6 155 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 MARS2Q96GW9 593 aaKnown RBP13.86□□□□□ -0.19
SNRPB-202ENST00000438552 GSX2Q9BZM3 304 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 DYNLRB1Q9NP97 96 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF701Q9NV72 531 aaPredicted RBP13.86□□□□□ -0.19
SNRPB-202ENST00000438552 TBCCD1Q9NVR7 557 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 PTTG3PQ9NZH4 202 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 TEP1Q99973 2627 aaKnown RBP13.85□□□□□ -0.19
SNRPB-202ENST00000438552 PRRC2AP48634 2157 aaKnown RBP13.85□□□□□ -0.19
SNRPB-202ENST00000438552 PRR32B1ATL7 298 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 H2BFMP0C1H6 154 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 SBK2P0C263 348 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 SLC2A1P11166 492 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 ALOX5APP20292 161 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 HSD11B1P28845 292 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 OPRL1P41146 370 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 ALDH3B1P43353 468 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 NUDT6P53370 316 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 GRB2P62993 217 aaKnown RBP13.85□□□□□ -0.19
SNRPB-202ENST00000438552 ADARB1P78563 741 aaKnown RBP13.85□□□□□ -0.19
SNRPB-202ENST00000438552 IL5RAQ01344 420 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 OCLNQ16625 522 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF718Q3SXZ3 478 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 LRRN1Q6UXK5 716 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 DHRSXQ8N5I4 330 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 KLF14Q8TD94 323 aaPredicted RBP13.85□□□□□ -0.19
SNRPB-202ENST00000438552 APOBEC3DQ96AK3 386 aaPredicted RBP13.85□□□□□ -0.19
SNRPB-202ENST00000438552 TBX5Q99593 518 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 DOK1Q99704 481 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 KCNJ15Q99712 375 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 FOXC2Q99958 501 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 APOL4Q9BPW4 351 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 ADI1Q9BV57 179 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 C1QTNF5Q9BXJ0 243 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 HAO2Q9NYQ3 351 aa13.85□□□□□ -0.19
SNRPB-202ENST00000438552 IGLV3-9A0A075B6K5 115 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 C5orf63A6NC05 138 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 H7C417 338 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 J3QW42 95 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 M0R233 179 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 PSMD9O00233 223 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 IGHV4-39P01824 125 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 LCATP04180 440 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 PAX1P15863 534 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 GCH1P30793 250 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 CAPGP40121 348 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 CX3CR1P49238 355 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 PPOXP50336 477 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 AQP4P55087 323 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 ATP5J2P56134 94 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 NKPD1Q17RQ9 610 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 SNAI3Q3KNW1 292 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 SLC25A30Q5SVS4 291 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF691Q5VV52 312 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 MEDAGQ5VYS4 303 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 MBNL2Q5VZF2 373 aaKnown RBP13.84□□□□□ -0.19
SNRPB-202ENST00000438552 TTC23Q5W5X9 447 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 DRAM2Q6UX65 266 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 COLCA1Q6ZS62 124 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 ZCCHC24Q8N2G6 241 aaKnown RBP13.84□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF283Q8N7M2 679 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 RHOXF1Q8NHV9 184 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 APH1BQ8WW43 257 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 GTF3AQ92664 365 aaKnown RBP13.84□□□□□ -0.19
SNRPB-202ENST00000438552 SORCS2Q96PQ0 1159 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 VRK1Q99986 396 aaPredicted RBP13.84□□□□□ -0.19
SNRPB-202ENST00000438552 CLN6Q9NWW5 311 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 TAAR3PQ9P1P4 343 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNRPB-202ENST00000438552 LRP12Q9Y561 859 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 PMF1-BGLAPU3KQ54 211 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 CHD3Q12873 2000 aaKnown RBP13.84□□□□□ -0.19
SNRPB-202ENST00000438552 ARID1AO14497 2285 aa13.84□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF670-ZNF695F2Z2N8 137 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 H3BSA7 217 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 MPZL2O60487 215 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 ADRA2AP08913 450 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 GNAO1P09471 354 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 BMP4P12644 408 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 SLC15A1P46059 708 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 MTNR1AP48039 350 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 EVX1P49640 407 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 PRSS12P56730 875 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 CXCR4P61073 352 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 ZNF91Q05481 1191 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 POU4F2Q12837 409 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 TMED1Q13445 227 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 HLXQ14774 488 aaPredicted RBP13.83□□□□□ -0.2
SNRPB-202ENST00000438552 SNCBQ16143 134 aa13.83□□□□□ -0.2
SNRPB-202ENST00000438552 SSX6Q7RTT6 188 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms