RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 PRSS45Q7RTY3 260 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SLC36A1Q7Z2H8 476 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 CPEB2Q7Z5Q1 589 aaKnown RBP6.62□□□□□ -1.35
COL17A1-204ENST00000433822 ADGRE4PQ86SQ3 457 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 ELMOD2Q8IZ81 293 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 DEFB119Q8N690 84 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 FADS6Q8N9I5 356 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 TMEM229BQ8NBD8 167 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 CLEC1AQ8NC01 280 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 OR1J4Q8NGS1 313 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 OR6X1Q8NH79 312 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SAP25Q8TEE9 199 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 CCDC107Q8WV48 283 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SLC25A36Q96CQ1 311 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 RBP7Q96R05 134 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 AMELYQ99218 206 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 CMKLR1Q99788 373 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SLC25A21Q9BQT8 299 aaPredicted RBP6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SLC7A5P2Q9GIP4 190 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 C1orf198Q9H425 327 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 NOX3Q9HBY0 568 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 G6PC2Q9NQR9 355 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SLC2A8Q9NY64 477 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 MYOTQ9UBF9 498 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 KLK11Q9UBX7 282 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 MGAT4AQ9UM21 535 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 PLEKHA6Q9Y2H5 1048 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 WIF1Q9Y5W5 379 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 U3KQA8 63 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 PCNX3Q9H6A9 2034 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 USP9XQ93008 2570 aaPredicted RBP6.62□□□□□ -1.35
COL17A1-204ENST00000433822 ASXL3Q9C0F0 2248 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 FREM3P0C091 2139 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 KIF26BQ2KJY2 2108 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 IGHV5-10-1A0A0J9YXX1 117 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 UBE2QL1A1L167 161 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 OR2M5A3KFT3 312 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 OR6C65A6NJZ3 312 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 C4orf47A7E2U8 309 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 PSMD9O00233 223 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 PRKNO60260 465 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-204ENST00000433822 SCRG1O75711 98 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 PNPP00491 289 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 IFNA7P01567 189 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 HLA-DQA2P01906 255 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 MAS1P04201 325 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 CD74P04233 296 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 ALDOBP05062 364 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 ERCC1P07992 297 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-204ENST00000433822 ITGA5P08648 1049 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 CXCL3P19876 107 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 CCL1P22362 96 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 CTSSP25774 331 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 PRSS3P35030 304 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 VEGFCP49767 419 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 ZP1P60852 638 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 TLE3Q04726 772 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 NKPD1Q17RQ9 610 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 C2orf76Q3KRA6 126 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 LINC00303Q3SY05 128 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 ESCO2Q56NI9 601 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 CLLU1Q5K131 121 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 PRAMEF17Q5VTA0 474 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 C1orf189Q5VU69 101 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 PMS2CLQ68D20 193 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 THOC7Q6I9Y2 204 aaKnown RBP6.61□□□□□ -1.35
COL17A1-204ENST00000433822 ASPHD2Q6ICH7 369 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 LPCAT3Q6P1A2 487 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 TEX261Q6UWH6 196 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 Q6ZSR3 168 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 NDUFAF7Q7L592 441 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 PPP1R3BQ86XI6 285 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 NOXO1Q8NFA2 376 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 OR2M3Q8NG83 312 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 OR51A4Q8NGJ6 313 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 OR10AC1Q8NH08 325 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 ELP5Q8TE02 316 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 SNAPC3Q92966 411 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 ZBTB8AQ96BR9 441 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 SPACA9Q96E40 222 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-204ENST00000433822 SLC25A44Q96H78 314 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-204ENST00000433822 SLX1AQ9BQ83 275 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 HEXA-AS1Q9H8Q6 139 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 TMEM165Q9HC07 324 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 PARD6AQ9NPB6 346 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 MED9Q9NWA0 146 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 FAM206AQ9NX38 181 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 PPP4R1LQ9P1A2 415 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 CYB5R1Q9UHQ9 305 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF222Q9UK12 451 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 OR52A1Q9UKL2 312 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 RAB22AQ9UL26 194 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 CLEC4AQ9UMR7 237 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 COA3Q9Y2R0 106 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-204ENST00000433822 RHBDD3Q9Y3P4 386 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 U3KQ87 197 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 CABIN1Q9Y6J0 2220 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 CELSR3Q9NYQ7 3312 aa6.61□□□□□ -1.35
COL17A1-204ENST00000433822 LAMA1P25391 3075 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 TRBV11-1A0A0K0K1C0 115 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms