RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 RASL12Q9NYN1 266 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 SEC16AO15027 2179 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 C17orf51A8MQB3 221 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 H3BSH0 61 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 BCL2L11O43521 198 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 RAD1O60671 282 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 WDPCPO95876 746 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 TTRP02766 147 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 NAT1P18440 290 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 POU3F2P20265 443 aaPredicted RBP12.18□□□□□ -0.46
COL6A3-207ENST00000433762 OR7A5Q15622 319 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 SMUG1Q53HV7 270 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 Q7L0L9 218 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 APCDD1LQ8NCL9 501 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 ST8SIA2Q92186 375 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 LINC00052Q96N35 136 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 FOXN4Q96NZ1 517 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 LDAHQ9H6V9 325 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 LMAN1LQ9HAT1 526 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 SDHAF3Q9NRP4 125 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 FGF21Q9NSA1 209 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 CTSFQ9UBX1 484 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 SUSD2Q9UGT4 822 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 KANTRA0A1W2PQU2 76 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 CEACAM18A8MTB9 384 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 TMEM14DPA8MWL7 114 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 M0QYG6 137 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 ALOX12BO75342 701 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 MPZL1O95297 269 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 GSTP1P09211 210 aaKnown RBP12.17□□□□□ -0.46
COL6A3-207ENST00000433762 FOSL2P15408 326 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 RAB3AP20336 220 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 LAP3P28838 519 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 OC90Q02509 493 aaPredicted RBP12.17□□□□□ -0.46
COL6A3-207ENST00000433762 POU3F1Q03052 451 aaPredicted RBP12.17□□□□□ -0.46
COL6A3-207ENST00000433762 KCNMB1Q16558 191 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 TFAP2EQ6VUC0 442 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 ACOT7LQ6ZUV0 252 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 FJX1Q86VR8 437 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 OR5L2Q8NGL0 311 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 OR1J2Q8NGS2 313 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 PHB2Q99623 299 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 CDX2Q99626 313 aaPredicted RBP12.17□□□□□ -0.46
COL6A3-207ENST00000433762 UBE2ZQ9H832 354 aaPredicted RBP12.17□□□□□ -0.46
COL6A3-207ENST00000433762 CNTD2Q9H8S5 307 aa12.17□□□□□ -0.46
COL6A3-207ENST00000433762 TMEM235A6NFC5 223 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 P2RY10O00398 339 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 SCO1O75880 301 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 HLA-AP01891 365 aaKnown RBP12.16□□□□□ -0.46
COL6A3-207ENST00000433762 SQSTM1Q13501 440 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 MOGAT2Q3SYC2 334 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 JMJD6Q6NYC1 403 aaPredicted RBP12.16□□□□□ -0.46
COL6A3-207ENST00000433762 LANCL3Q6ZV70 420 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 MOB3CQ70IA8 216 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 PGAP1Q75T13 922 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 ANKRD37Q7Z713 158 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 PAQR4Q8N4S7 273 aaPredicted RBP12.16□□□□□ -0.46
COL6A3-207ENST00000433762 PXT1Q8NFP0 134 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 C11orf40Q8WZ69 217 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 CDC6Q99741 560 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 PBOV1Q9GZY1 135 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 SERINC1Q9NRX5 453 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 VSIG4Q9Y279 399 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 B3GALT1Q9Y5Z6 326 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 SZT2Q5T011 3432 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 ALPK2Q86TB3 2170 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 LOC102725191A0A1B0GVB3 256 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 ZNF878C9JN71 531 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 SYT7O43581 403 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 CCL1P22362 96 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
COL6A3-207ENST00000433762 CLDN6P56747 220 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 FMODQ06828 376 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 UNC119Q13432 240 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 PNLIPRP3Q17RR3 467 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 TUSC1Q2TAM9 212 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 TMED4Q7Z7H5 227 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 TRAPPC6BQ86SZ2 158 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 STT3BQ8TCJ2 826 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 ELP5Q8TE02 316 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 ARL5BQ96KC2 179 aa12.16□□□□□ -0.46
COL6A3-207ENST00000433762 MRPS17Q9Y2R5 130 aaKnown RBP12.16□□□□□ -0.46
COL6A3-207ENST00000433762 NOP16Q9Y3C1 178 aaKnown RBP12.16□□□□□ -0.46
COL6A3-207ENST00000433762 A0A0B4J2A0 478 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 C9orf170A2RU37 121 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 DUS4LO95620 317 aaKnown RBP12.15□□□□□ -0.46
COL6A3-207ENST00000433762 PNLIPP16233 465 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 IL11P20809 199 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 CXADRP78310 365 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 ACY1Q03154 408 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 TMEM81Q6P7N7 255 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 LINC00346Q8IVM7 164 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 NOXO1Q8NFA2 376 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 OR10R2Q8NGX6 335 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 FGGYQ96C11 551 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 C5orf34Q96MH7 638 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 SHPKQ9UHJ6 478 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 KNL1Q8NG31 2342 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 STK17BO94768 372 aa12.15□□□□□ -0.46
COL6A3-207ENST00000433762 VSIG8P0DPA2 414 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms