RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 IL21RQ9HBE5 538 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 KCMF1Q9P0J7 381 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF222Q9UK12 451 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 LAMTOR5O43504 91 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 GPANK1O95872 356 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 RRASP10301 218 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 PRF1P14222 555 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 CTGFP29279 349 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 SOX3P41225 446 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 VIPR2P41587 438 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 EMP2P54851 167 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 GXYLT1Q4G148 440 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 CPEB2Q7Z5Q1 589 aaKnown RBP3.4□□□□□ -1.87
SHPRH-205ENST00000433355 OR7G2Q8NG99 324 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 OR1M1Q8NGA1 313 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 WFDC5Q8TCV5 224 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 MITD1Q8WV92 249 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 SFXN3Q9BWM7 321 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 LTB4R2Q9NPC1 389 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 MRPS7Q9Y2R9 242 aaKnown RBP3.4□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM210A6NLX4 147 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 M0R3H8 397 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 OR2A4O95047 310 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 VEGFCP49767 419 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 EMDP50402 254 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 PAX5Q02548 391 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 SLC3A1Q07837 685 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 PEA15Q15121 130 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 APH1BQ8WW43 257 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 RAB3CQ96E17 227 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM41AQ96HV5 264 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 SAMD8Q96LT4 415 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 OR2A7Q96R45 310 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 FAM173AQ9BQD7 235 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 HINT3Q9NQE9 182 aaKnown RBP3.4□□□□□ -1.87
SHPRH-205ENST00000433355 CFAP20Q9Y6A4 193 aaKnown RBP3.4□□□□□ -1.87
SHPRH-205ENST00000433355 TRBV6-7A0A0A0MS04 114 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 PRRT4C9JH25 899 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 ST8SIA3O43173 380 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 SGCEO43556 437 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 SCRG1O75711 98 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 CST4P01036 141 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 IGKV3-11P04433 115 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 SFTPDP35247 375 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 STARD6P59095 220 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 PPIAP62937 165 aaKnown RBP3.4□□□□□ -1.87
SHPRH-205ENST00000433355 IL13RA1P78552 427 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 IL13RA2Q14627 380 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 SYPL1Q16563 259 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 SIGIRRQ6IA17 410 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 DESI1Q6ICB0 168 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM185AQ8NFB2 350 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 OR13C8Q8NGS7 320 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 GRHL3Q8TE85 626 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 ADGRL4Q9HBW9 690 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 RASL12Q9NYN1 266 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 OR52A1Q9UKL2 312 aa3.4□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF724A8MTY0 619 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PPP6CO00743 305 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SOX14O95416 240 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 AMY2AP04746 511 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SPARCP09486 303 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SLC19A1P41440 591 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 NR0B1P51843 470 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 DEFB103AP81534 67 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PCGF3Q3KNV8 242 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 GTDC1Q4AE62 458 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OVCH2Q7RTZ1 564 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 NFAM1Q8NET5 270 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ROBO4Q8WZ75 1007 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 DPH1Q9BZG8 443 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PRDM14Q9GZV8 571 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ARL6Q9H0F7 186 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 FOXD3Q9UJU5 478 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF223Q9UK11 482 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 COL4A3Q01955 1670 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 C17orf112F2Z3M2 114 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ASAH2BP0C7U1 165 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SMIM10L1P0DMW3 83 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 GRPRP30550 384 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 GALNTL5Q7Z4T8 443 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 C1orf87Q8N0U7 546 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 LRTM2Q8N967 370 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OR51A7Q8NH64 312 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 MCHR2Q969V1 340 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 APH1AQ96BI3 265 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PELI1Q96FA3 418 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SMIM10Q96HG1 83 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 NIPSNAP3BQ9BS92 247 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OCIAD1Q9NX40 245 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 GIMAP2Q9UG22 337 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 HIDE1A8MVS5 230 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 RPS19P39019 145 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 EFNA3P52797 238 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SLC37A1P57057 533 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ARFRP1Q13795 201 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 EBPQ15125 230 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 MPV17LQ2QL34 196 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF791Q3KP31 576 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM225Q6GV28 225 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms