RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 MS4A18Q3C1V0 323 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 VWA2Q5GFL6 755 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 C11orf87Q6NUJ2 197 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 THADAQ6YHU6 1953 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 Q6ZS52 159 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 LYG2Q86SG7 212 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 TSTD1Q8NFU3 115 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 OR1J2Q8NGS2 313 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 OR1L3Q8NH93 324 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 RNF133Q8WVZ7 376 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 PHYHIPLQ96FC7 376 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 KCNK17Q96T54 332 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 SLC6A7Q99884 636 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 OR11A1Q9GZK7 315 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 CHRDQ9H2X0 955 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 RASL12Q9NYN1 266 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 FBXL2Q9UKC9 423 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 TNFSF18Q9UNG2 199 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 NOP16Q9Y3C1 178 aaKnown RBP10.1□□□□□ -0.79
USP4-205ENST00000431357 RHBDD3Q9Y3P4 386 aa10.1□□□□□ -0.79
USP4-205ENST00000431357 CPAMD8Q8IZJ3 1885 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 OR14I1A6ND48 311 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 EIF1AYO14602 144 aaKnown RBP10.09□□□□□ -0.79
USP4-205ENST00000431357 WISP1O95388 367 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 ZNF28P17035 718 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 ZBTB25P24278 435 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 EIF1AXP47813 144 aaKnown RBP10.09□□□□□ -0.79
USP4-205ENST00000431357 EFNA3P52797 238 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 C17orf67Q0P5P2 114 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 BTN1A1Q13410 526 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 ZNF169Q14929 603 aaPredicted RBP10.09□□□□□ -0.79
USP4-205ENST00000431357 DEFB133Q30KQ1 61 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 MOGAT2Q3SYC2 334 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 SCGB2B2Q4G0G5 96 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 KLHL24Q6TFL4 600 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 PLXDC1Q8IUK5 500 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 D2HGDHQ8N465 521 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 DTWD2Q8NBA8 298 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 PDCD10Q9BUL8 212 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 VN1R1Q9GZP7 353 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 PISDQ9UG56 409 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 FARSAQ9Y285 508 aaKnown RBP10.09□□□□□ -0.79
USP4-205ENST00000431357 PLEKHA6Q9Y2H5 1048 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 A0A1B0GX78 115 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 TMEM235A6NFC5 223 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 RAB27BO00194 218 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 P2RY10O00398 339 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 ZNF208O43345 1280 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 BCL2L11O43521 198 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 IL2RAP01589 272 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 HLA-AP01891 365 aaKnown RBP10.09□□□□□ -0.79
USP4-205ENST00000431357 RLN2P04090 185 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 HLA-DOBP13765 273 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 LTBRP36941 435 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 CXADRP78310 365 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 CDNFQ49AH0 187 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 ZNF813Q6ZN06 617 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 ACOT7LQ6ZUV0 252 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 FJX1Q86VR8 437 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 SLC22A24Q8N4F4 322 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 SMRP1Q8NCR6 262 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 OR10H5Q8NGA6 315 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 OR4D6Q8NGJ1 314 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 RLN3Q8WXF3 142 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 DDIT4LQ96D03 193 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 CHST11Q9NPF2 352 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 SEMA5BQ9P283 1151 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 FBLN5Q9UBX5 448 aa10.09□□□□□ -0.79
USP4-205ENST00000431357 C2CD4DB7Z1M9 353 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 ADAM10O14672 748 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 ERCC1P07992 297 aaPredicted RBP10.08□□□□□ -0.8
USP4-205ENST00000431357 SFTPCP11686 197 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 STARP49675 285 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 MEOX2P50222 304 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 HSF1Q00613 529 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 OR7A5Q15622 319 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 OR10K2Q6IF99 312 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 JMJD6Q6NYC1 403 aaPredicted RBP10.08□□□□□ -0.8
USP4-205ENST00000431357 CFAP77Q6ZQR2 320 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 MOB3CQ70IA8 216 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 TRAPPC6BQ86SZ2 158 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 KMT5CQ86Y97 462 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 LINC00346Q8IVM7 164 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 STPG2Q8N412 459 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 ACBD4Q8NC06 268 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 OR1M1Q8NGA1 313 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 MITD1Q8WV92 249 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 FGGYQ96C11 551 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 DMRTA2Q96SC8 542 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 PHB2Q99623 299 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 NKX3-1Q99801 234 aaPredicted RBP10.08□□□□□ -0.8
USP4-205ENST00000431357 PCED1AQ9H1Q7 454 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 CNTD2Q9H8S5 307 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 CENPMQ9NSP4 180 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 FAM206AQ9NX38 181 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 COA4Q9NYJ1 87 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 GPR160Q9UJ42 338 aa10.08□□□□□ -0.8
USP4-205ENST00000431357 VSIG4Q9Y279 399 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms