RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 TICRRQ7Z2Z1 1910 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ATG12O94817 140 aa11.58□□□□□ -0.55
PTCH1-207ENST00000429896 OPRM1P35372 400 aa11.58□□□□□ -0.55
PTCH1-207ENST00000429896 LIMK1P53667 647 aa11.58□□□□□ -0.55
PTCH1-207ENST00000429896 PDZD9Q8IXQ8 264 aa11.58□□□□□ -0.55
PTCH1-207ENST00000429896 LRRC30A6NM36 301 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 TO15178 435 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 NGFRP08138 427 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 IGFBP1P08833 259 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-207ENST00000429896 PMP22Q01453 160 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 IKZF1Q13422 519 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 RAB31Q13636 194 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 ACSM3Q53FZ2 586 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 SLC46A3Q7Z3Q1 461 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 ZAR1Q86SH2 424 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 OR6V1Q8N148 313 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 SLC25A19Q9HC21 320 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 RAB9BQ9NP90 201 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 GLTPQ9NZD2 209 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 AGFG2O95081 481 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 GRPP07492 148 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 IFI6P09912 130 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 TGM1P22735 817 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 TGM4P49221 684 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 PCBP3P57721 371 aaKnown RBP11.58□□□□□ -0.56
PTCH1-207ENST00000429896 TAS2R20P59543 309 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 EDDM3AQ14507 147 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 SMN1Q16637 294 aaKnown RBP11.58□□□□□ -0.56
PTCH1-207ENST00000429896 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 DPPA2Q7Z7J5 298 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 OR5AS1Q8N127 324 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 BHLHE23Q8NDY6 225 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 SLAMF6Q96DU3 332 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 TEAD3Q99594 435 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 SLC16A6O15403 523 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 UBCP0CG48 685 aaKnown RBP11.58□□□□□ -0.56
PTCH1-207ENST00000429896 JUNBP17275 347 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-207ENST00000429896 NFYBP25208 207 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 IL2RGP31785 369 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 SHEQ5VZ18 495 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 OR52A1Q9UKL2 312 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 DOCK6Q96HP0 2047 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 FUOMA2VDF0 154 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 SLC2A10O95528 541 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 CHRNB4P30926 498 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 ZNF658BQ4V348 819 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-207ENST00000429896 C1orf185Q5T7R7 199 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 SUMF1Q8NBK3 374 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 FLVCR1-AS1Q8TAF5 88 aa11.58□□□□□ -0.56
PTCH1-207ENST00000429896 PUS1Q9Y606 427 aaKnown RBP eCLIP11.58□□□□□ -0.56
PTCH1-207ENST00000429896 B4DXG7 233 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 P2RY10O00398 339 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 RIPPLY1Q0D2K3 151 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 ARTNQ5T4W7 220 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 PSMF1Q92530 271 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 GABARAPL3Q9BY60 117 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 DIMT1Q9UNQ2 313 aaKnown RBP11.57□□□□□ -0.56
PTCH1-207ENST00000429896 TRAPPC4Q9Y296 219 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 CACNG2Q9Y698 323 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 SLC22A23A1A5C7 686 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 H7C1Q1 480 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 FBXO24O75426 580 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 EDDM3BP56851 147 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 RAB5BP61020 215 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 SPCS2Q15005 226 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 C12orf45Q8N5I9 185 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-207ENST00000429896 SIMC1Q8NDZ2 872 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 ITPKCQ96DU7 683 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 A0A1W2PPV4 95 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 GPRIN2O60269 458 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 SC5DO75845 299 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 HEXAP06865 529 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 HABP2Q14520 560 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-207ENST00000429896 AADACL3Q5VUY0 350 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 PEAR1Q5VY43 1037 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-207ENST00000429896 KNL1Q8NG31 2342 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 ASB5Q8WWX0 329 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 B3GAT1Q9P2W7 334 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 SNRNP70P08621 437 aaKnown RBP11.57□□□□□ -0.56
PTCH1-207ENST00000429896 TNK1Q13470 666 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 TMPRSS11FQ6ZWK6 438 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 NAA50Q9GZZ1 169 aaKnown RBP11.57□□□□□ -0.56
PTCH1-207ENST00000429896 SLC5A6Q9Y289 635 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 IGKV1D-16P01601 117 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 HOXD4P09016 255 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-207ENST00000429896 NPBWR1P48145 328 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 ACTBP60709 375 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 ACTG1P63261 375 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 CFHR1Q03591 330 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 ALKBH6Q3KRA9 238 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 CDCP2Q5VXM1 449 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 SLC7A5P1Q8MH63 180 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 TSPAN2O60636 221 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 PTTG1O95997 202 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 MT-CO2P00403 227 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 ARL6IP1Q15041 203 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 ACSM5Q6NUN0 579 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 BAIAP2L2Q6UXY1 529 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 FDCSPQ8NFU4 85 aa11.57□□□□□ -0.56
PTCH1-207ENST00000429896 SF3B5Q9BWJ5 86 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms