RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 OR7C2O60412 319 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 CCR9P51686 369 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 C17orf107Q6ZR85 190 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 CXorf67Q86X51 503 aaPredicted RBP13.99□□□□□ -0.17
PTPRF-206ENST00000429895 ADGRG3Q86Y34 549 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 NANOGP1Q8N7R0 232 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 OR52I2Q8NH67 350 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 KISS1RQ969F8 398 aaPredicted RBP13.99□□□□□ -0.17
PTPRF-206ENST00000429895 ZNF835Q9Y2P0 537 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 PI3P19957 117 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 SOX18P35713 384 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 RPS19P39019 145 aaKnown RBP13.99□□□□□ -0.17
PTPRF-206ENST00000429895 PGFP49763 221 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 PCBP3P57721 371 aaKnown RBP13.99□□□□□ -0.17
PTPRF-206ENST00000429895 RGS7BPQ6MZT1 257 aaPredicted RBP13.99□□□□□ -0.17
PTPRF-206ENST00000429895 TCTN3Q6NUS6 607 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 ST8SIA4Q92187 359 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 NDFIP1Q9BT67 221 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 SPACA1Q9HBV2 294 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 TNFRSF19Q9NS68 423 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 BOLA1Q9Y3E2 137 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 CTXN2P0C2S0 81 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 H2AFB1P0C5Y9 115 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 HOXD12P35452 270 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 RFX2P48378 723 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 CCR5P51681 352 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 SNRPGP62308 76 aaKnown RBP13.98□□□□□ -0.17
PTPRF-206ENST00000429895 ANKRD34AQ69YU3 496 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 ING1Q9UK53 422 aaPredicted RBP13.98□□□□□ -0.17
PTPRF-206ENST00000429895 H0YIG0 161 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 GFYI3L273 518 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 PLRG1O43660 514 aaKnown RBP13.98□□□□□ -0.17
PTPRF-206ENST00000429895 GPX2P18283 190 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 ZNF816Q0VGE8 651 aaPredicted RBP13.98□□□□□ -0.17
PTPRF-206ENST00000429895 MN1Q10571 1320 aaPredicted RBP13.98□□□□□ -0.17
PTPRF-206ENST00000429895 FUNDC1Q8IVP5 155 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 OLIG1Q8TAK6 271 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 FGF14Q92915 247 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 FBXW5Q969U6 566 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 FZR1Q9UM11 496 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 GOLT1BQ9Y3E0 138 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 CRYBG1Q9Y4K1 1723 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 UGT2A1Q9Y4X1 527 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 MYO9BQ13459 2157 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 A0A1W2PPC4 97 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 TMEM235A6NFC5 223 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 ST8SIA3O43173 380 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 PPICP45877 212 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 DEFA6Q01524 100 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 FAAP20Q6NZ36 180 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 DHRS4L2Q6PKH6 230 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 PELI3Q8N2H9 469 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 SLC35B4Q969S0 331 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 POU2F2P09086 479 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 CDAP32320 146 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 PAQR6Q6TCH4 344 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 SLC25A21Q9BQT8 299 aaPredicted RBP13.98□□□□□ -0.17
PTPRF-206ENST00000429895 PBOV1Q9GZY1 135 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 SLC25A6P12236 298 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 BAMBIQ13145 260 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 TAF9Q16594 264 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 AVPI1Q5T686 147 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 SLC51BQ86UW2 128 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 IKZF5Q9H5V7 419 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 SLC35D1Q9NTN3 355 aa13.98□□□□□ -0.17
PTPRF-206ENST00000429895 MYH7BA7E2Y1 1941 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 SPRY1O43609 319 aaPredicted RBP13.97□□□□□ -0.17
PTPRF-206ENST00000429895 MT-ND4LP03901 98 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 SPEM2Q0P670 501 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 TMEM268Q5VZI3 342 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 PRR27Q6MZM9 219 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 ACSM5Q6NUN0 579 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 LSRQ86X29 649 aaPredicted RBP13.97□□□□□ -0.17
PTPRF-206ENST00000429895 ARIH2OSQ8N7S6 290 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 BCL7CQ8WUZ0 217 aaPredicted RBP13.97□□□□□ -0.17
PTPRF-206ENST00000429895 PLPPR2Q96GM1 343 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 SHISA8B8ZZ34 492 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 FCMRO60667 390 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 NTF3P20783 257 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 OR10A3P58181 314 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 HLA-BQ31612 363 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 OR11G2Q8NGC1 345 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 AKR7LQ8NHP1 331 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 TIMM9Q9Y5J7 89 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 DPTQ07507 201 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 SLC7A6Q92536 515 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 ACER3Q9NUN7 267 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 SLC22A13Q9Y226 551 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 OR2A25A4D2G3 310 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 FAM90A27PA6NNH2 459 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 XRCC2O43543 280 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 CYTIPO60759 359 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 OR1J1Q8NGS3 322 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 HINT3Q9NQE9 182 aaKnown RBP13.97□□□□□ -0.17
PTPRF-206ENST00000429895 A0A0B4J203 849 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 A0A1W2PR80 420 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 UBE2MP61081 183 aaKnown RBP13.97□□□□□ -0.17
PTPRF-206ENST00000429895 SHBQ15464 509 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 C9orf50Q5SZB4 431 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 Q6ZS52 159 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms