RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 HLXQ14774 488 aaPredicted RBP12.48□□□□□ -0.41
MSH5-208ENST00000429846 SMARCD3Q6STE5 483 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 COLCA1Q6ZS62 124 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 NLRC3Q7RTR2 1065 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 KLBQ86Z14 1044 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 CELF2-AS1Q8N7Q2 184 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 UPRTQ96BW1 309 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 NEIL1Q96FI4 390 aaPredicted RBP12.48□□□□□ -0.41
MSH5-208ENST00000429846 DHRS1Q96LJ7 313 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 C1orf147Q96MC9 270 aaPredicted RBP12.48□□□□□ -0.41
MSH5-208ENST00000429846 HCAR1Q9BXC0 346 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 TMEM165Q9HC07 324 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 LHFPL6Q9Y693 200 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 IGHV2-70DA0A0C4DH43 119 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 IMPA2O14732 288 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 MLNRO43193 412 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 CD80P33681 288 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 RBMXP38159 391 aaKnown RBP12.47□□□□□ -0.41
MSH5-208ENST00000429846 CDKN2AP42771 156 aaKnown RBP12.47□□□□□ -0.41
MSH5-208ENST00000429846 ECH1Q13011 328 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 KRT72Q14CN4 511 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 ZNF404Q494X3 552 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 OTPQ5XKR4 325 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 JAZF1Q86VZ6 243 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
MSH5-208ENST00000429846 OR8B3Q8NGG8 313 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 ZNF420Q8TAQ5 688 aaPredicted RBP12.47□□□□□ -0.41
MSH5-208ENST00000429846 FANK1Q8TC84 345 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 RAB40AQ8WXH6 277 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 ERGIC1Q969X5 290 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 DACT3Q96B18 629 aaPredicted RBP12.47□□□□□ -0.41
MSH5-208ENST00000429846 ZNF48Q96MX3 618 aaPredicted RBP12.47□□□□□ -0.41
MSH5-208ENST00000429846 OR8B2Q96RD0 313 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 C1QTNF5Q9BXJ0 243 aa12.47□□□□□ -0.41
MSH5-208ENST00000429846 IGLV1-36A0A0B4J1U3 117 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 TRBV4-1A0A0J9YWV2 114 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 POM121CA8CG34 1229 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 DCTN6O00399 190 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 PHYHO14832 338 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 ARPC3O15145 178 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 CYB5R3P00387 301 aaPredicted RBP12.46□□□□□ -0.41
MSH5-208ENST00000429846 PLATP00750 562 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 RENP00797 406 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 NCK1P16333 377 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 FPR3P25089 353 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 CENPAP49450 140 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 SMIM11AP58511 58 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 SEC23BQ15437 767 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 MEP1BQ16820 701 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 KRTAP27-1Q3LI81 207 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 SLC36A3Q495N2 470 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 LEG1Q6P5S2 330 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 MOGAT3Q86VF5 341 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 BHLHE23Q8NDY6 225 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 SLC26A10Q8NG04 563 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 C7orf34Q96L11 122 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 TSSK2Q96PF2 358 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 ERMAPQ96PL5 475 aaPredicted RBP12.46□□□□□ -0.41
MSH5-208ENST00000429846 DUX5Q96PT3 197 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 ATF6BQ99941 703 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 TMEM246Q9BRR3 403 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 SPAG4Q9NPE6 437 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 DCAF13Q9NV06 445 aaKnown RBP12.46□□□□□ -0.41
MSH5-208ENST00000429846 TMEM100Q9NV29 134 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 B9D1Q9UPM9 204 aa12.46□□□□□ -0.41
MSH5-208ENST00000429846 TRAV40A0A0B4J280 105 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 F5H5P2 479 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 H0YL77 283 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 GMNNO75496 209 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 PPP1R3DO95685 299 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 IRF2P14316 349 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 SLC6A6P31641 620 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 MDH1P40925 334 aaKnown RBP12.45□□□□□ -0.42
MSH5-208ENST00000429846 PITPNBP48739 271 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 MALLQ13021 153 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 SLC9A3R2Q15599 337 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 GLYATQ6IB77 296 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 DCDC5Q6ZRR9 648 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 OR6V1Q8N148 313 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 Q8TCH9 128 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 CMTM5Q96DZ9 223 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 FUZQ9BT04 418 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 OR52D1Q9H346 318 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 UNKLQ9H9P5 680 aaKnown RBP12.45□□□□□ -0.42
MSH5-208ENST00000429846 CLN8Q9UBY8 286 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 NOP16Q9Y3C1 178 aaKnown RBP12.45□□□□□ -0.42
MSH5-208ENST00000429846 MEGF8Q7Z7M0 2845 aa12.45□□□□□ -0.42
MSH5-208ENST00000429846 KIR2DS1A0A191URI9 304 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 ZNF205O95201 554 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 GPANK1O95872 356 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 ACSM4P0C7M7 580 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 IGHV4-38-2P0DP08 117 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 NOS3P29474 1203 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 CD200P41217 278 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 BPIFB3P59826 476 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 PSME3P61289 254 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 GK2Q14410 553 aaPredicted RBP12.44□□□□□ -0.42
MSH5-208ENST00000429846 RSPO1Q2MKA7 263 aaPredicted RBP12.44□□□□□ -0.42
MSH5-208ENST00000429846 RFX4Q33E94 735 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 SLC18B1Q6NT16 456 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms