RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 KIR3DL3Q8N743 410 aa10.95□□□□□ -0.66
HLA-F-219ENST00000429294 BHLHE23Q8NDY6 225 aa10.95□□□□□ -0.66
HLA-F-219ENST00000429294 WFDC12Q8WWY7 111 aa10.95□□□□□ -0.66
HLA-F-219ENST00000429294 TAF15Q92804 592 aaKnown RBP eCLIP10.95□□□□□ -0.66
HLA-F-219ENST00000429294 ERGIC1Q969X5 290 aa10.95□□□□□ -0.66
HLA-F-219ENST00000429294 HDHD2Q9H0R4 259 aa10.95□□□□□ -0.66
HLA-F-219ENST00000429294 SYT4Q9H2B2 425 aa10.95□□□□□ -0.66
HLA-F-219ENST00000429294 NMNAT1Q9HAN9 279 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-219ENST00000429294 TNFRSF19Q9NS68 423 aa10.95□□□□□ -0.66
HLA-F-219ENST00000429294 COA3Q9Y2R0 106 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-219ENST00000429294 SOX21Q9Y651 276 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-219ENST00000429294 A0A087WUU8 490 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 IGHV3-64DA0A0J9YX35 117 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 LOC100653049A0A140TA62 436 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 IQCF6A8MYZ5 107 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 HMGB1P1B2RPK0 211 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-219ENST00000429294 F5H5P2 479 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 GSTA4O15217 222 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 RER1O15258 196 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 KRT34O76011 436 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 NDUFB2O95178 105 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 ZNF682O95780 498 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 LIPFP07098 398 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 FPR3P25089 353 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 SDHAP31040 664 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 NPY4RP50391 375 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 FGF12P61328 243 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 CBX1P83916 185 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 MALLQ13021 153 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 FHL1Q13642 323 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 IFI44LQ53G44 452 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 CCDC92Q53HC0 331 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-219ENST00000429294 WDR25Q64LD2 544 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-219ENST00000429294 FIP1L1Q6UN15 594 aaKnown RBP10.94□□□□□ -0.66
HLA-F-219ENST00000429294 VTCN1Q7Z7D3 282 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 TMEM86BQ8N661 226 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 FITM2Q8N6M3 262 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 UBE2FQ969M7 185 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 COQ7Q99807 217 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 PCGF1Q9BSM1 259 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 TMEM120AQ9BXJ8 343 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 PRDM13Q9H4Q3 707 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 MARCH7Q9H992 704 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 ERVK-18Q9QC07 812 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 NOP16Q9Y3C1 178 aaKnown RBP10.94□□□□□ -0.66
HLA-F-219ENST00000429294 SNX13Q9Y5W8 968 aa10.94□□□□□ -0.66
HLA-F-219ENST00000429294 CLPSL1A2RUU4 121 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 H0YL77 283 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 J3KTA2 159 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 P2RY10O00398 339 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 SOCS2O14508 198 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 CDC42EP2O14613 210 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 MLNRO43193 412 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 NDUFA7O95182 113 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 TROVE2P10155 538 aaKnown RBP eCLIP10.93□□□□□ -0.66
HLA-F-219ENST00000429294 CRABP1P29762 137 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 GATA4P43694 442 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 RPS6KA3P51812 740 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 RAD23AP54725 363 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 RPL15P61313 204 aaKnown RBP10.93□□□□□ -0.66
HLA-F-219ENST00000429294 KLF10Q13118 480 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 TBPL2Q6SJ96 375 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 Q6YL49 198 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 ZNF620Q6ZNG0 422 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 FAM122BQ7Z309 247 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 ARPINQ7Z6K5 226 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.93□□□□□ -0.66
HLA-F-219ENST00000429294 CELF2-AS1Q8N7Q2 184 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 TBC1D15Q8TC07 691 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 SSMEM1Q8WWF3 244 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 GATAD2BQ8WXI9 593 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 DACT3Q96B18 629 aaPredicted RBP10.93□□□□□ -0.66
HLA-F-219ENST00000429294 TECTBQ96PL2 329 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 NUAK2Q9H093 628 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 MMP27Q9H306 513 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 MMADHCQ9H3L0 296 aaPredicted RBP10.93□□□□□ -0.66
HLA-F-219ENST00000429294 ANKRD19PQ9H560 264 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 KRCC1Q9NPI7 259 aaPredicted RBP10.93□□□□□ -0.66
HLA-F-219ENST00000429294 VSX1Q9NZR4 365 aaPredicted RBP10.93□□□□□ -0.66
HLA-F-219ENST00000429294 RPS6KA6Q9UK32 745 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 POMT1Q9Y6A1 747 aa10.93□□□□□ -0.66
HLA-F-219ENST00000429294 FFAR1O14842 300 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 TOX4O94842 621 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 HLA-DPB1P04440 258 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 ECH1Q13011 328 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 KCNMB1Q16558 191 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 FAM201AQ5SY85 155 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 OTPQ5XKR4 325 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 PNLDC1Q8NA58 520 aaKnown RBP10.92□□□□□ -0.66
HLA-F-219ENST00000429294 Q8TCH9 128 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 SPRYD4Q8WW59 207 aaPredicted RBP10.92□□□□□ -0.66
HLA-F-219ENST00000429294 FAM46AQ96IP4 442 aaKnown RBP10.92□□□□□ -0.66
HLA-F-219ENST00000429294 TRIM15Q9C019 465 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 SLC22A4Q9H015 551 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 NRIP3Q9NQ35 241 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 TRIM36Q9NQ86 728 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 C1RLQ9NZP8 487 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 PDP1Q9P0J1 537 aaPredicted RBP10.92□□□□□ -0.66
HLA-F-219ENST00000429294 AURKCQ9UQB9 309 aa10.92□□□□□ -0.66
HLA-F-219ENST00000429294 FAM32AQ9Y421 112 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms