RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ATF6BQ99941 703 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 CDADC1Q9BWV3 514 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 TMPRSS13Q9BYE2 586 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 TBC1D23Q9NUY8 699 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 IL19Q9UHD0 177 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 PPP1R3CQ9UQK1 317 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 A0A0G2JMP0 313 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 A0A0X1KG70 313 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 TVP23AA6NH52 213 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 F5H5K5 113 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 H0YL77 283 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 GASTP01350 101 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 ACSM4P0C7M7 580 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 GGT2P36268 569 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 MS4A2Q01362 244 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 ZNF770Q6IQ21 691 aaPredicted RBP15.52■□□□□ 0.08
PSPC1-202ENST00000427943 RPL13AP3Q6NVV1 102 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 LYPD4Q6UWN0 246 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 DHFR2Q86XF0 187 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 ZNF283Q8N7M2 679 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 AQP11Q8NBQ7 271 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 OR8G5Q8NG78 346 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 OR4M2Q8NGB6 313 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 OR9Q1Q8NGQ5 310 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 ST7LQ8TDW4 575 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 TRIM15Q9C019 465 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 PNRC2Q9NPJ4 139 aaKnown RBP15.52■□□□□ 0.08
PSPC1-202ENST00000427943 CYB5R1Q9UHQ9 305 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 U3KQV3 271 aa15.52■□□□□ 0.08
PSPC1-202ENST00000427943 IGHV3-64DA0A0J9YX35 117 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 SURF4O15260 269 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 SOX14O95416 240 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 FAM107AO95990 144 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 PSKH1P11801 424 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 ADRA2CP18825 462 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 MMP16P51512 607 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 TRAP1Q12931 704 aaKnown RBP15.51■□□□□ 0.07
PSPC1-202ENST00000427943 KRTAP27-1Q3LI81 207 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 RASSF6Q6ZTQ3 369 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 NAA40Q86UY6 237 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 ARHGAP24Q8N264 748 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 LINC00471Q8N535 108 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 SLC37A3Q8NCC5 494 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 CCDC197Q8NCU1 140 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 PROKR2Q8NFJ6 384 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 OR51L1Q8NGJ5 315 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 ZNF420Q8TAQ5 688 aaPredicted RBP15.51■□□□□ 0.07
PSPC1-202ENST00000427943 ZNRF4Q8WWF5 429 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 CCDC124Q96CT7 223 aaKnown RBP15.51■□□□□ 0.07
PSPC1-202ENST00000427943 MAP6Q96JE9 813 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 SIGLEC11Q96RL6 698 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 C1QTNF5Q9BXJ0 243 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 MUC13Q9H3R2 512 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 MAGIXQ9H6Y5 334 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 PCDHB10Q9UN67 800 aa15.51■□□□□ 0.07
PSPC1-202ENST00000427943 DOCK11Q5JSL3 2073 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 IQCF6A8MYZ5 107 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 MLNRO43193 412 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 VENTXO95231 258 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 T-ENOLP0DO92 83 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 EPHA1P21709 976 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 CALB2P22676 271 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 SEC61A1P61619 476 aaKnown RBP15.5■□□□□ 0.07
PSPC1-202ENST00000427943 BTG1P62324 171 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 TRIM25Q14258 630 aaKnown RBP15.5■□□□□ 0.07
PSPC1-202ENST00000427943 ZMYND11Q15326 602 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 COLCA1Q6ZS62 124 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 OR10S1Q8NGN2 331 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 OR4Q3Q8NH05 313 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 CLPTM1LQ96KA5 538 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 MEGF10Q96KG7 1140 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 ZNF582Q96NG8 517 aaPredicted RBP15.5■□□□□ 0.07
PSPC1-202ENST00000427943 DDOQ99489 341 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 TSSK6Q9BXA6 273 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 REEP1Q9H902 201 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 GCM1Q9NP62 436 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 ARMC1Q9NVT9 282 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 IL20Q9NYY1 176 aa15.5■□□□□ 0.07
PSPC1-202ENST00000427943 SAMHD1Q9Y3Z3 626 aaKnown RBP15.5■□□□□ 0.07
PSPC1-202ENST00000427943 F5H5P2 479 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 LCATP04180 440 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 ZNF823P16415 610 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 ZFP36P26651 326 aaKnown RBP15.49■□□□□ 0.07
PSPC1-202ENST00000427943 ECH1Q13011 328 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 CRMP1Q14194 572 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 FAM98BQ52LJ0 330 aaKnown RBP15.49■□□□□ 0.07
PSPC1-202ENST00000427943 ZNF362Q5T0B9 420 aaPredicted RBP15.49■□□□□ 0.07
PSPC1-202ENST00000427943 OR2T5Q6IEZ7 315 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 C1QL2Q7Z5L3 287 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 KLHL36Q8N4N3 616 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 SPICQ8N5J4 248 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 SEMA6DQ8NFY4 1073 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 OR13G1Q8NGZ3 307 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 OR2T4Q8NH00 348 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 OR2T29Q8NH02 315 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 SLC30A2Q9BRI3 323 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 HCAR1Q9BXC0 346 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 KCNG2Q9UJ96 466 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 COMMD3-BMI1R4GMX3 469 aa15.49■□□□□ 0.07
PSPC1-202ENST00000427943 TMEM178BH3BS89 294 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms