RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 METAP1DQ6UB28 335 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-206ENST00000426196 RBM45Q8IUH3 476 aaKnown RBP11.64□□□□□ -0.55
HDAC6-206ENST00000426196 DTX3Q8N9I9 347 aa11.64□□□□□ -0.55
HDAC6-206ENST00000426196 BOLLQ8N9W6 283 aaKnown RBP11.64□□□□□ -0.55
HDAC6-206ENST00000426196 GPR32P1Q8NGA4 272 aa11.64□□□□□ -0.55
HDAC6-206ENST00000426196 PFN4Q8NHR9 129 aa11.64□□□□□ -0.55
HDAC6-206ENST00000426196 APOBEC3DQ96AK3 386 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-206ENST00000426196 CLPTM1LQ96KA5 538 aa11.64□□□□□ -0.55
HDAC6-206ENST00000426196 ECSITQ9BQ95 431 aa11.64□□□□□ -0.55
HDAC6-206ENST00000426196 ROPN1BQ9BZX4 212 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-206ENST00000426196 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
HDAC6-206ENST00000426196 RANBP3Q9H6Z4 567 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-206ENST00000426196 CNTD2Q9H8S5 307 aa11.64□□□□□ -0.55
HDAC6-206ENST00000426196 ROPN1Q9HAT0 212 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-206ENST00000426196 ONECUT1Q9UBC0 465 aa11.64□□□□□ -0.55
HDAC6-206ENST00000426196 RNF7Q9UBF6 113 aa11.64□□□□□ -0.55
HDAC6-206ENST00000426196 DYNC2H1Q8NCM8 4307 aaKnown RBP11.64□□□□□ -0.55
HDAC6-206ENST00000426196 EPPK1P58107 5090 aaKnown RBP11.63□□□□□ -0.55
HDAC6-206ENST00000426196 RYR2Q92736 4967 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 EVPLLA8MZ36 301 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 NPFFO15130 113 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 UBDO15205 165 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 IGF2P01344 180 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 TSPAN19P0C672 248 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 CD33P20138 364 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 RBM34P42696 430 aaKnown RBP11.63□□□□□ -0.55
HDAC6-206ENST00000426196 MAB21L1Q13394 359 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 LAPTM4AQ15012 233 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 LRIF1Q5T3J3 769 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 TSPYL5Q86VY4 417 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-206ENST00000426196 CALHM3Q86XJ0 350 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 NDUFA11Q86Y39 141 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 MSRB3Q8IXL7 192 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 CMTM4Q8IZR5 234 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 OR4D11Q8NGI4 311 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 PPP1R35Q8TAP8 253 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 ST8SIA4Q92187 359 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 PRSS27Q9BQR3 290 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 CPPED1Q9BRF8 314 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-206ENST00000426196 HCAR1Q9BXC0 346 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 FN3KRPQ9HA64 309 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 RAB18Q9NP72 206 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 SIRT7Q9NRC8 400 aa11.63□□□□□ -0.55
HDAC6-206ENST00000426196 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
HDAC6-206ENST00000426196 A0A1B0GWJ7 208 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 MEIOCA2RUB1 952 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 OR6C6A6NF89 314 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 A6NIZ1 184 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 FBP2O00757 339 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 DVL1O14640 695 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 SCG5P05408 212 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 KITP10721 976 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 CD200P41217 278 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 RAD23AP54725 363 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 RAP1BP61224 184 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 RAP1AP62834 184 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 HOXA4Q00056 320 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-206ENST00000426196 AQP6Q13520 282 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 ZBTB37Q5TC79 503 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 PRAMEF6Q5VXH4 476 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 C11orf65Q8NCR3 313 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 OR1F12Q8NHA8 337 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 LIPHQ8WWY8 451 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 C20orf141Q9NUB4 165 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 VAPAQ9P0L0 249 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 SLAMF8Q9P0V8 285 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 ATPIF1Q9UII2 106 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 MAB21L2Q9Y586 359 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 GMEB1Q9Y692 573 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 SACSQ9NZJ4 4579 aa11.62□□□□□ -0.55
HDAC6-206ENST00000426196 A0A1W2PRD5 423 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 A0A1W2PRF3 423 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 A0A1W2PRM7 423 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 OOEPA6NGQ2 149 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 H3BUX3 64 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 M0QX08 132 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 PPP1R3DO95685 299 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 GYPAP02724 150 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 DBHP09172 617 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 IGLL1P15814 213 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 GPX2P18283 190 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 SAA4P35542 130 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 MPPED2Q15777 294 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 BEND6Q5SZJ8 279 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-206ENST00000426196 PGBD2Q6P3X8 592 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 TMEM255BQ8WV15 326 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 TMEM239Q8WW34 195 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.61□□□□□ -0.55
HDAC6-206ENST00000426196 MAELQ96JY0 434 aaKnown RBP11.61□□□□□ -0.55
HDAC6-206ENST00000426196 FAM234AQ9H0X4 552 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 IKZF5Q9H5V7 419 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 WDR76Q9H967 626 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 HIF3AQ9Y2N7 669 aa11.61□□□□□ -0.55
HDAC6-206ENST00000426196 NOP16Q9Y3C1 178 aaKnown RBP11.61□□□□□ -0.55
HDAC6-206ENST00000426196 TAS2R41P59536 307 aa11.6□□□□□ -0.55
HDAC6-206ENST00000426196 CTXN1P60606 82 aa11.6□□□□□ -0.55
HDAC6-206ENST00000426196 STX1BP61266 288 aa11.6□□□□□ -0.55
HDAC6-206ENST00000426196 COL10A1Q03692 680 aa11.6□□□□□ -0.55
HDAC6-206ENST00000426196 LY6EQ16553 131 aa11.6□□□□□ -0.55
HDAC6-206ENST00000426196 NKAIN4Q8IVV8 208 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms